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AMDSBA1_30_6

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(7020..7343)

Top 3 Functional Annotations

Value Algorithm Source
(db=HMMPfam db_id=PF03965 from=3 to=98 evalue=7.7e-12 interpro_id=IPR005650 interpro_description=Penicillinase repressor GO=Molecular Function: DNA binding (GO:0003677), Biological Process: negative regulation of transcription, DNA-dependent (GO:0045892)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.70e-12
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=3 to=103 evalue=4.6e-06) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.60e-06
penicillinase repressor KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 102.0
  • Bit_score: 78
  • Evalue 1.10e-12

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Taxonomy

Methylacidiphilum kamchatkense → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 324
GTGTCAACGGTCAAAAGCGTGCACCGTACCGTGGCTCAAGATCATCCTATATCGGTTAACACGGTGGCGACCGTGATGAATCGTTTGGTGTCCCAGAAAATATTGGTTCGCGAAGGCCGCATTCGCCATTATGTCTATCGGCTGGCACCCGCAGAAAGTGTTCTGAAAGCCCATGCCATGGAATCGGTGGAGACATTGATGTCGGAATTCGGTGAATCCTGCCTCGTTCACTTTGTGGACGCGATTGATGAACTGGATCCGAATGCGTTGGCTAAACTGGAGGCTATCGTTCGTGCTCGAACTCAAGAAAAACTCCGTGAATAG
PROTEIN sequence
Length: 108
VSTVKSVHRTVAQDHPISVNTVATVMNRLVSQKILVREGRIRHYVYRLAPAESVLKAHAMESVETLMSEFGESCLVHFVDAIDELDPNALAKLEAIVRARTQEKLRE*