| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| Putative uncharacterized protein n=2 Tax=Dorea formicigenerans RepID=B0G7W9_9FIRM (db=UNIREF evalue=7.0e-18 bit_score=96.7 identity=29.0 coverage=87.55364806866953) | similarity |
UNIREF
DB: UNIREF |
29.0 | 87.55 | 96 | 7.00e-18 | pdx:Psed_4165 |
| seg (db=Seg db_id=seg from=174 to=188) | iprscan |
interpro
DB: Seg |
null | null | null | null | pdx:Psed_4165 |
| (db=HMMPfam db_id=PF00392 from=14 to=74 evalue=5.7e-20 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.70e-20 | pdx:Psed_4165 |
| "Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=3 to=115 evalue=1.2e-19) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.20e-19 | pdx:Psed_4165 |
| no description (db=HMMSmart db_id=SM00345 from=15 to=74 evalue=1.7e-19 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.70e-19 | pdx:Psed_4165 |
| no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=4 to=77 evalue=5.3e-17 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
null | null | null | 5.30e-17 | pdx:Psed_4165 |
| (db=HMMPfam db_id=PF07729 from=95 to=219 evalue=3.9e-16 interpro_id=IPR011711 interpro_description=GntR, C-terminal) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.90e-16 | pdx:Psed_4165 |
| no description (db=HMMSmart db_id=SM00895 from=94 to=221 evalue=3.8e-12 interpro_id=IPR011711 interpro_description=GntR, C-terminal) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 3.80e-12 | pdx:Psed_4165 |
| HTHGNTR (db=FPrintScan db_id=PR00035 from=48 to=64 evalue=3.1e-08 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.10e-08 | pdx:Psed_4165 |
| HTHGNTR (db=FPrintScan db_id=PR00035 from=34 to=48 evalue=3.1e-08 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.10e-08 | pdx:Psed_4165 |
| SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=15 to=78 evalue=0.00067) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 6.70e-04 | pdx:Psed_4165 |
| TRANSCRIPTION REGULATOR AMINOTRANSFERASE GNTR-RELATED (db=HMMPanther db_id=PTHR11751:SF1 from=15 to=78 evalue=0.00067) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 6.70e-04 | pdx:Psed_4165 |
| HTH_GNTR (db=ProfileScan db_id=PS50949 from=9 to=77 evalue=23.439 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.34e+01 | pdx:Psed_4165 |
| GntR family transcriptional regulator {ECO:0000313|EMBL:EWY39742.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="S |
UNIPROT
DB: UniProtKB |
34.0 | 241.0 | 121 | 2.10e-24 | W9H4X1_9PROT | |
| GntR family transcriptional regulator |
KEGG
DB: KEGG |
33.0 | 224.0 | 116 | 1.00e-23 | pdx:Psed_4165 | |
| GntR domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUL4_PSEUX | similarity |
UNIREF
DB: UNIREF90 |
33.0 | null | 115 | 1.50e-23 | pdx:Psed_4165 |