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AMDSBA1_30_33 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Putative uncharacterized protein n=2 Tax=Dorea formicigenerans RepID=B0G7W9_9FIRM (db=UNIREF evalue=7.0e-18 bit_score=96.7 identity=29.0 coverage=87.55364806866953) similarity UNIREF
DB: UNIREF
29.0 87.55 96 7.00e-18 pdx:Psed_4165
seg (db=Seg db_id=seg from=174 to=188) iprscan interpro
DB: Seg
null null null null pdx:Psed_4165
(db=HMMPfam db_id=PF00392 from=14 to=74 evalue=5.7e-20 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 5.70e-20 pdx:Psed_4165
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=3 to=115 evalue=1.2e-19) iprscan interpro
DB: superfamily
null null null 1.20e-19 pdx:Psed_4165
no description (db=HMMSmart db_id=SM00345 from=15 to=74 evalue=1.7e-19 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 1.70e-19 pdx:Psed_4165
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=4 to=77 evalue=5.3e-17 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 5.30e-17 pdx:Psed_4165
(db=HMMPfam db_id=PF07729 from=95 to=219 evalue=3.9e-16 interpro_id=IPR011711 interpro_description=GntR, C-terminal) iprscan interpro
DB: HMMPfam
null null null 3.90e-16 pdx:Psed_4165
no description (db=HMMSmart db_id=SM00895 from=94 to=221 evalue=3.8e-12 interpro_id=IPR011711 interpro_description=GntR, C-terminal) iprscan interpro
DB: HMMSmart
null null null 3.80e-12 pdx:Psed_4165
HTHGNTR (db=FPrintScan db_id=PR00035 from=48 to=64 evalue=3.1e-08 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 3.10e-08 pdx:Psed_4165
HTHGNTR (db=FPrintScan db_id=PR00035 from=34 to=48 evalue=3.1e-08 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 3.10e-08 pdx:Psed_4165
SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=15 to=78 evalue=0.00067) iprscan interpro
DB: HMMPanther
null null null 6.70e-04 pdx:Psed_4165
TRANSCRIPTION REGULATOR AMINOTRANSFERASE GNTR-RELATED (db=HMMPanther db_id=PTHR11751:SF1 from=15 to=78 evalue=0.00067) iprscan interpro
DB: HMMPanther
null null null 6.70e-04 pdx:Psed_4165
HTH_GNTR (db=ProfileScan db_id=PS50949 from=9 to=77 evalue=23.439 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 2.34e+01 pdx:Psed_4165
GntR family transcriptional regulator {ECO:0000313|EMBL:EWY39742.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="S UNIPROT
DB: UniProtKB
34.0 241.0 121 2.10e-24 W9H4X1_9PROT
GntR family transcriptional regulator KEGG
DB: KEGG
33.0 224.0 116 1.00e-23 pdx:Psed_4165
GntR domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUL4_PSEUX similarity UNIREF
DB: UNIREF90
33.0 null 115 1.50e-23 pdx:Psed_4165