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AMDSBA1_38_8 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
seg (db=Seg db_id=seg from=288 to=300) iprscan interpro
DB: Seg
null null null null tro:trd_0497
(db=HMMPfam db_id=PF03466 from=96 to=303 evalue=8.3e-53 interpro_id=IPR005119 interpro_description=LysR, substrate-binding) iprscan interpro
DB: HMMPfam
null null null 8.30e-53 tro:trd_0497
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=91 to=304 evalue=2.9e-48) iprscan interpro
DB: superfamily
null null null 2.90e-48 tro:trd_0497
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=10 to=121 evalue=2.9e-26) iprscan interpro
DB: superfamily
null null null 2.90e-26 tro:trd_0497
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=174 to=266 evalue=9.9e-21) iprscan interpro
DB: Gene3D
null null null 9.90e-21 tro:trd_0497
(db=HMMPfam db_id=PF00126 from=12 to=71 evalue=2.6e-20 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 2.60e-20 tro:trd_0497
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=10 to=96 evalue=1.1e-19 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 1.10e-19 tro:trd_0497
HTHLYSR (db=FPrintScan db_id=PR00039 from=48 to=59 evalue=7.1e-08 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 7.10e-08 tro:trd_0497
HTHLYSR (db=FPrintScan db_id=PR00039 from=38 to=48 evalue=7.1e-08 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 7.10e-08 tro:trd_0497
HTHLYSR (db=FPrintScan db_id=PR00039 from=27 to=38 evalue=7.1e-08 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 7.10e-08 tro:trd_0497
HTH_LYSR (db=ProfileScan db_id=PS50931 from=10 to=67 evalue=28.45 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 2.85e+01 tro:trd_0497
RuBisCO operon transcriptional regulator KEGG
DB: KEGG
51.3 298.0 282 1.90e-73 tro:trd_0497
RuBisCO operon transcriptional regulator {ECO:0000313|EMBL:ACM05752.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium r UNIPROT
DB: UniProtKB
51.3 298.0 282 9.40e-73 B9KYF2_THERP
RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYF2_THERP similarity UNIREF
DB: UNIREF90
51.3 null 281 2.80e-73 tro:trd_0497