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AMDSBA1_39_4

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(5800..7311)

Top 3 Functional Annotations

Value Algorithm Source
sensor histidine kinase similarity KEGG
DB: KEGG
  • Identity: 27.8
  • Coverage: 403.0
  • Bit_score: 113
  • Evalue 1.50e-22
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=2 Tax=Pseudovibrio RepID=B6R9S7_9RHOB (db=UNIREF evalue=4.3e-12 bit_score=78.6 identity=30.8 coverage=38.69047619047619) similarity UNIREF
DB: UNIREF
  • Identity: 30.8
  • Coverage: 38.69
  • Bit_score: 78
  • Evalue 4.30e-12
GGDEF: diguanylate cyclase (GGDEF) domain (db=HMMTigr db_id=TIGR00254 from=337 to=497 evalue=1.0e-28 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted) iprscan interpro
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Vibrio fortis → Vibrio → Vibrionales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
GTGTCCGAACCTACAATACTAAATGATGGAATGAATGGTGCCGAATCTCATCGTGCCTTTGTGTCACTCTCCGAAATTGCTCAGTTGCAGGCGGCTATACTCGATGCCACGGGTCTAGAGGACATGATCTATCGTATCACCAAGATCCTCAGCATGACCTTGGAAGTGGATATCATTCTTGTCCTGGGGTATGATCGCAACGACAATACCATGAACCTTTTGGGAAAACTGGGTAATCGCAATGAGCAGTACAATCCCGCTACAGACATCCTGACGCCGGACACCGTTGATCAAATCCTGCGCGGAGAAACCGTGACGCTGTCCCAGGGAGAGATCGACAGTGTAGCTATTTCCTTCGGAATTTGGTATCCCCTTCGTTTGGCCAAAGACCGCATAGTCGGTATGCTCGGGATGTTTCGCCTGAAACCTCAGAGTTTGTCCGCCGCCGATAACATTGTCTTGGAAACCGTGCTCAGAAGCATAGCCCAAGCAATTTACCAAAACCAGCAAATGACGATACAAAAACAACGCATTCAACGACTTGAACGCATCGAGATTATGAGCCGAGAATTGACCTCTGCAACTTCGACACAGAAAGTGATCGAGACGGCGGTACATTGGACGCCTTTGATTCTCGGATTCGATGGGGCTCTTTGGGGGGAAGTACGTGATCGGCAGTTCATCTTGCACGGATCCTATCGCCAAAACGCAAGTTCTGGGTGGCAGCCCGAAATCAGTCAATTTCACGTGTCCTGGTATGAAGTGATAAAGCGGTTGCAACGACCGCTGTTGATACCATATCATCGTCTGCCGCGTTTTCTAAGCAAGGGTCCCAAGCCATCCGATCTCTTGATAATTCCTTTATTGGGCAGAACGCAAGAGACGGGCCGAGTTCTCGTCTTGTGGCATGATCGCTTCCGCCGCATGGCGGCAGAAATAATTTCCATGGGTTCGGTGGTGGGTTCTCACGTGTCTACGGCGTGGGAAAATGTTGAATTATTGGACAAATTGCGGTATCAAATCGACCATGATGAATTGACAGGGTTATGGAATCATCGTGCGTTGTGGCGGGATCTAAACCAGAACGCAGAGAAAGCGTGTCAAGAATCCCCACTATGGTTCGCTATGTTGGATGTCGACAACTTTAAGAAGATCAATGACGCTTTTGGCCACCGTGCTGGAGACAGGATCCTCCAACAATTTTCGGCGGCTCTGCGCCAAGCTATTGCAGACAAACCAACTGTCAAGGGCTACCGGGTGGGAGGAGATGAGTTTGCTCTGATGGCCAGTTCCTCAAGTCGACAAGACGTGATGCAAATGATTGATCGCATCTATCAGGATATCCGGCTGAACTTAAACCCGCCGATTTCGATGTCCGTAGGAATTGCGGCAATCACAGGTCCACTCAGCAGTGAATTGTTGTTTCAGCAGGCTGACCGTGCGCTATACACGGCAAAGGACGGTGGCAAGGGACGCGTTTTTTGTGCGTCAACGACAAGCCCCGAAATCTAA
PROTEIN sequence
Length: 504
VSEPTILNDGMNGAESHRAFVSLSEIAQLQAAILDATGLEDMIYRITKILSMTLEVDIILVLGYDRNDNTMNLLGKLGNRNEQYNPATDILTPDTVDQILRGETVTLSQGEIDSVAISFGIWYPLRLAKDRIVGMLGMFRLKPQSLSAADNIVLETVLRSIAQAIYQNQQMTIQKQRIQRLERIEIMSRELTSATSTQKVIETAVHWTPLILGFDGALWGEVRDRQFILHGSYRQNASSGWQPEISQFHVSWYEVIKRLQRPLLIPYHRLPRFLSKGPKPSDLLIIPLLGRTQETGRVLVLWHDRFRRMAAEIISMGSVVGSHVSTAWENVELLDKLRYQIDHDELTGLWNHRALWRDLNQNAEKACQESPLWFAMLDVDNFKKINDAFGHRAGDRILQQFSAALRQAIADKPTVKGYRVGGDEFALMASSSSRQDVMQMIDRIYQDIRLNLNPPISMSVGIAAITGPLSSELLFQQADRALYTAKDGGKGRVFCASTTSPEI*