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AMDSBA1_44_19 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase sigma-30 subunit SigH similarity KEGG
DB: KEGG
82.0 222.0 363 4.70e-98 sap:Sulac_0254
RNA polymerase sigma-H factor n=29 Tax=Bacillus RepID=RPSH_BACLI (db=UNIREF evalue=3.5e-83 bit_score=313.5 identity=76.2 coverage=91.11111111111111) similarity UNIREF
DB: UNIREF
76.2 91.11 313 3.50e-83 sap:Sulac_0254
rbh rbh UNIREF
DB: UNIREF
null null null null sap:Sulac_0254
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=176 to=203 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: PatternScan
null null null 0.0 sap:Sulac_0254
SIGMA70_1 (db=PatternScan db_id=PS00715 from=59 to=72 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
null null null 0.0 sap:Sulac_0254
RNA polymerase sigma-H factor (db=HMMPIR db_id=PIRSF002939 from=2 to=215 evalue=6.8e-147 interpro_id=IPR016371 interpro_description=RNA polymerase sigma-H factor GO=Molecular Function: DNA binding (GO:0003677), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPIR
null null null 6.80e-147 sap:Sulac_0254
spore_sigH: RNA polymerase sigma-H factor (db=HMMTigr db_id=TIGR02859 from=12 to=209 evalue=4.0e-136 interpro_id=IPR014218 interpro_description=RNA polymerase sigma-H type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO: iprscan interpro
DB: HMMTigr
null null null 4.00e-136 sap:Sulac_0254
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=30 to=208 evalue=2.0e-29 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
null null null 2.00e-29 sap:Sulac_0254
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=17 to=105 evalue=1.2e-21 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact iprscan interpro
DB: superfamily
null null null 1.20e-21 sap:Sulac_0254
(db=HMMPfam db_id=PF04542 from=36 to=104 evalue=1.4e-14 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 1.40e-14 sap:Sulac_0254
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=140 to=205 evalue=2.1e-09 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: iprscan interpro
DB: superfamily
null null null 2.10e-09 sap:Sulac_0254
(db=HMMPfam db_id=PF08281 from=169 to=204 evalue=3.5e-07 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 3.50e-07 sap:Sulac_0254
no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=19 to=104 evalue=7.1e-07) iprscan interpro
DB: Gene3D
null null null 7.10e-07 sap:Sulac_0254
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=151 to=205 evalue=0.00082 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 8.20e-04 sap:Sulac_0254
Uncharacterized protein {ECO:0000313|EMBL:AEW03823.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob UNIPROT
DB: UniProtKB
82.0 222.0 363 2.30e-97 G8TWX5_SULAD
RNA polymerase, sigma 30 subunit, SigH n=2 Tax=Sulfobacillus acidophilus RepID=G8TWX5_SULAD similarity UNIREF
DB: UNIREF90
82.0 null 362 6.90e-98 sap:Sulac_0254