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AMDSBA1_45_20

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 24208..25239

Top 3 Functional Annotations

Value Algorithm Source
periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 333.0
  • Bit_score: 252
  • Evalue 1.40e-64
Alanine racemase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I397_9CLOT (db=UNIREF evalue=1.8e-46 bit_score=192.2 identity=32.2 coverage=95.93023255813954) similarity UNIREF
DB: UNIREF
  • Identity: 32.2
  • Coverage: 95.93
  • Bit_score: 192
  • Evalue 1.80e-46
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=9 to=27 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

Alicyclobacillus acidoterrestris → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1032
ATGCCTCCCAATCGGCCTCGCACGATTAAGGATGTGGCGGCATGGGCTCAGGTTTCGACTGCAACGGTTTCGCGAGTCATCAACCACGCCGGGAACGTTCGGCCTCATACTGCGGACCGGGTGGCCAACGCTTTAGAGGCACTGGGTTATGTTCCCAATGCCTGGGCCCGGGCGATGGCCACGGACGGTTCAGATTTGGTGGGTTTAATCGTTCCCGATATTTTAAATCCCTTTTTCGCCGCTATCTACAGTGGACTCAATGAAACCGCTAAAAGCCGGGGCTTGGCCGTGTGGATGGTCGACAGCGGTGACAATTCTGAACAGGAGAGGCAAATGCTGCATATGCTAGGTGGTTACCGGGCGCGAGGCATCGCGATCACGCCCGCTCATCCCGCAGCCAACCTCCGCGCCATCGAACGGATAGGTGTGCCTATCTGTCTGGTCGATCGCCGCCTGGCGAAGAACCTTTGGGATATGGTCTTGATCGACAATGTTACCGGATCCCGTCAGGTGGCACAGATTTTCGTGGCCGCAGGACATCAGCGAATCGCCATCATTGCCGGTCCGCAAAACAGCACGCCGGGACTGGAGCGTCTCAGCGGTTTTAGAGATGCCTTGGAGAAAGAGGGACTCAGCATGCCCCCTGAATACATCAAGATCGGCGACTTTCGCCTGAACAGTGGCTATGCGCTGGGACAGGAATTGCTCGCGTTGGACCGGCCTCCGACCGCCATCTTCAGCTGCAATAATTTAATGACGATGGGTCTCTTGCAGGCCATTCATGCACACCCCGCCCACTCACTCGGGAAAACGGTAGCCGTGGTAGGATTTGACGACATTCCGATTTCTACTTTGACCGACCCGCCTCTGACCGTAGTTTCGCGCCCGATGAGAGAAATGGGAGTTCAAGCGGCAAGATTAATTATGGCGCGGATGGAGTCTCCGGCGAAACCTTTGGAAACGGTGGTTTTGGGGCCGCAACTTATTATTCGCGGCTCGGAAAAAAACCCGGGGTTGTTGCGTTGGATTTAA
PROTEIN sequence
Length: 344
MPPNRPRTIKDVAAWAQVSTATVSRVINHAGNVRPHTADRVANALEALGYVPNAWARAMATDGSDLVGLIVPDILNPFFAAIYSGLNETAKSRGLAVWMVDSGDNSEQERQMLHMLGGYRARGIAITPAHPAANLRAIERIGVPICLVDRRLAKNLWDMVLIDNVTGSRQVAQIFVAAGHQRIAIIAGPQNSTPGLERLSGFRDALEKEGLSMPPEYIKIGDFRLNSGYALGQELLALDRPPTAIFSCNNLMTMGLLQAIHAHPAHSLGKTVAVVGFDDIPISTLTDPPLTVVSRPMREMGVQAARLIMARMESPAKPLETVVLGPQLIIRGSEKNPGLLRWI*