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AMDSBA1_46_10

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(10807..11565)

Top 3 Functional Annotations

Value Algorithm Source
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 247.0
  • Bit_score: 191
  • Evalue 3.60e-46
Putative aga operon transcriptional repressor n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2M8_9PLAN (db=UNIREF evalue=1.6e-20 bit_score=105.5 identity=31.0 coverage=92.88537549407114) similarity UNIREF
DB: UNIREF
  • Identity: 31.0
  • Coverage: 92.89
  • Bit_score: 105
  • Evalue 1.60e-20
HTH_DEOR_1 (db=PatternScan db_id=PS00894 from=5 to=39 evalue=0.0 interpro_id=IPR018356 interpro_description=Transcription regulator, HTH DeoR-type, conserved site GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

Eubacterium limosum → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 759
ATGCTGGATGAGCGACGGCAAGAGCTAGCTCAAATTCTAGTTCAAACGGGAAAACTAGTTGTAAAAGACTTAGCCGCATCCTATCATGTTTCCGCTGAAACTATTCGGAAAGATATCGCCTACCTAGAAAAGTTGGGGATTGCCAAAAAGACTCACGGCGGCGCTATATACATTAATGATGAACGCGAACTTCCCTTTTTCCACACTAGTACCTTGAATAGAAATCTCAAAGCGGCAGTGGCACAAAAGGCTGTAAGTCTAATCCGAGGGCGGGTAGTTGTTATGGATGGAGGAAGTACGACTCTGGCGATTGCGCGCCTGTTATCTTTAAAGGAAAATATCACGGTTTTCACTAATTCGTTAAGTGCAGTTCCGATCTTGGCAAACGCGACCGGGGTGAATTTGATCTTAACCGGTGGCGAAGTGAGAAAAGTAAGCCAGGACCAAGTCGGTTCATGGACTACGCGTGCAATCCGCGAAATCAGTGCTGACATTGCCTTCATTGGCGCTAATAGTCTAGTCCAAAAATCTGGTCCATCGACGTCCAACATGAATGAAGTCGAGGTCAAACAGGCCATGATTGCAGCATCCAACCGAGCTTATTTAGTGGTTGATTCATCCAAGCTTAATGTGGTTAGCACATACCAATTTGCGACTTGGAGGGAATTCGCAGGCATTGTAACGGATAAAGGCATCTCAGAGGAATTTGTGGATCGCGTGAGCAAATTTACGGAGGTGATTATAGCCGATGAAACCTAA
PROTEIN sequence
Length: 253
MLDERRQELAQILVQTGKLVVKDLAASYHVSAETIRKDIAYLEKLGIAKKTHGGAIYINDERELPFFHTSTLNRNLKAAVAQKAVSLIRGRVVVMDGGSTTLAIARLLSLKENITVFTNSLSAVPILANATGVNLILTGGEVRKVSQDQVGSWTTRAIREISADIAFIGANSLVQKSGPSTSNMNEVEVKQAMIAASNRAYLVVDSSKLNVVSTYQFATWREFAGIVTDKGISEEFVDRVSKFTEVIIADET*