ggKbase home page

AMDSBA1_46_23

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 24613..25368

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator TrmB similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 230.0
  • Bit_score: 242
  • Evalue 1.80e-61
Transcriptional regulator, TrmB n=2 Tax=Sulfobacillus acidophilus RepID=G8TWY9_9FIRM (db=UNIREF evalue=1.9e-61 bit_score=241.5 identity=50.4 coverage=90.87301587301587) similarity UNIREF
DB: UNIREF
  • Identity: 50.4
  • Coverage: 90.87
  • Bit_score: 241
  • Evalue 1.90e-61
(db=HMMPfam db_id=PF01978 from=10 to=78 evalue=6.0e-14 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.00e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 756
GTGATAGCGATAGACCCGGTTAAAGAACTGCAAAAACTCGGCTGGACAGAATTGGAAGCTAAGATATATGTCAGCTTGATCACCAGTCCAGAATCCTTAACAGGATATCAGGTGGCGAAAATGGCGCGGGTTGCCCGGGCCAATGTCTATCCGGTTTTAGACCGGCTGATTAGGCGGGGAGCGGTGACGGAGGATCCCGAGTCTCCGGGGCCGCGTTACCAAGCCGTGTCCTTTAATCTGGTTTCCCAGGCGCAATTGGCGGCTGTGCGCCAATCTCTGTCGGCTATTGAAGAGAATCTGCCCGAAGTGCGAAAGCCGCACCGGTTGATTACTGCGCGTGGGGAGAGTGCCCTTCACACGCATGCCGCCGGACTTGTGGCGGCGGCCCGGCACCACTTGGATATCGGCGCTTCGTATAATACCATCCAACCCTTTGCCGGTGCCCTGCAGGAGGCAAATAATCGGGGCGTTGTGGAAAAATTTCTGTGTTTCGACAATTGTCCCGCGCCAGGTTGCGGCGTCTGCCGGAACCCGGCGCCTGTTTATCCGGGAGAATTTAGTCCTAGAGGTTGGCTCATGCTGATAAAGGACAATGACGAAACTCTTATTGCCATGGGAGAAGGAAACCAGAGCGAGTTGGTGCTAACTAATATGGAACCGATCCGGGAAAGTTTACGGATACTTTTTTCTGTAGGGGAACACAGCTCGGATATTCCAAGATCCCCACGGGTCAGCGAAGCGAATAAGAGGGACTAA
PROTEIN sequence
Length: 252
VIAIDPVKELQKLGWTELEAKIYVSLITSPESLTGYQVAKMARVARANVYPVLDRLIRRGAVTEDPESPGPRYQAVSFNLVSQAQLAAVRQSLSAIEENLPEVRKPHRLITARGESALHTHAAGLVAAARHHLDIGASYNTIQPFAGALQEANNRGVVEKFLCFDNCPAPGCGVCRNPAPVYPGEFSPRGWLMLIKDNDETLIAMGEGNQSELVLTNMEPIRESLRILFSVGEHSSDIPRSPRVSEANKRD*