ggKbase home page

AMDSBA1_56_7 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
oxyR; LysR family transcriptional regulator similarity KEGG
DB: KEGG
44.3 289.0 242 2.10e-61 say:TPY_3017
Transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=D9VD63_9ACTO (db=UNIREF evalue=2.1e-14 bit_score=85.5 identity=27.1 coverage=91.18644067796609) similarity UNIREF
DB: UNIREF
27.1 91.19 85 2.10e-14 say:TPY_3017
(db=HMMPfam db_id=PF03466 from=87 to=288 evalue=2.7e-45 interpro_id=IPR005119 interpro_description=LysR, substrate-binding) iprscan interpro
DB: HMMPfam
null null null 2.80e-45 say:TPY_3017
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=85 to=294 evalue=7.1e-40) iprscan interpro
DB: superfamily
null null null 7.10e-40 say:TPY_3017
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=111 evalue=2.2e-28) iprscan interpro
DB: superfamily
null null null 2.20e-28 say:TPY_3017
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=87 evalue=7.3e-23 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 7.30e-23 say:TPY_3017
(db=HMMPfam db_id=PF00126 from=3 to=61 evalue=8.1e-22 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 8.10e-22 say:TPY_3017
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=164 to=260 evalue=2.6e-14) iprscan interpro
DB: Gene3D
null null null 2.60e-14 say:TPY_3017
HTHLYSR (db=FPrintScan db_id=PR00039 from=29 to=39 evalue=1.4e-07 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.40e-07 say:TPY_3017
HTHLYSR (db=FPrintScan db_id=PR00039 from=18 to=29 evalue=1.4e-07 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.40e-07 say:TPY_3017
HTHLYSR (db=FPrintScan db_id=PR00039 from=39 to=50 evalue=1.4e-07 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.40e-07 say:TPY_3017
HTH_LYSR (db=ProfileScan db_id=PS50931 from=1 to=58 evalue=33.751 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 3.38e+01 say:TPY_3017
Transcriptional regulator, LysR family n=2 Tax=Sulfobacillus acidophilus RepID=F8I6U8_SULAT similarity UNIREF
DB: UNIREF90
44.6 null 243 1.00e-61 say:TPY_3017
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEJ41175.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.; UNIPROT
DB: UniProtKB
44.3 289.0 242 1.00e-60 F8I6U8_SULAT