ggKbase home page

AMDSBA1_56_16

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(16579..17229)

Top 3 Functional Annotations

Value Algorithm Source
pyrophosphatase PpaX similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 204.0
  • Bit_score: 127
  • Evalue 4.20e-27
Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LXU2_9FIRM (db=UNIREF evalue=6.6e-10 bit_score=70.1 identity=30.5 coverage=93.08755760368663) similarity UNIREF
DB: UNIREF
  • Identity: 30.5
  • Coverage: 93.09
  • Bit_score: 70
  • Evalue 6.60e-10
HAD-like (db=superfamily db_id=SSF56784 from=1 to=206 evalue=4.9e-45 interpro_id=IPR023214 interpro_description=HAD-like domain) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.20e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geomicrobium sp. JCM 19039 → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 651
TTGGCTGTCGCGTTATTCGATTTGGATGGAACACTCCTCGATACGGTACCGCTCATTACGTTGTGCTTTCAGCGGATGTTCCGGAAATATGGGAATTATGATATTTCCCAGGAAGCGGTTCATGAGATGTTTGGGCCCGGCGAATCGATTATTTTTCGCAGGGAGTTTGGGGACCTATGGGAAACAGTCCTGGCGGATTATCTGGATTGCTATGCCAAGGGCCACGATCAGTTGGCTGTCGAGCCGTGGATGATGGAGATATTGAAGGGCCTACGAGCCAAGGGCTTTCCCTTGGCCATTATCACTAATAAAGAAAGGGATACAACTCAGTTGACTCTCGATCATGTCCATTTATCATCGTATTTCGACGTGATCGTGACGGCCCAGGACGTGGAGCATCCCAAACCCTATCCCGACGGGATTTTGAAGGCTCTAAAGACACTGGGTGCCACGAGAGATGAGGCGATTTTTATTGGTGACACCATGAATGACCGGGACGCCGCCAAAGCAAGCAATGTGAAGTTCGTTCAGGCGTTGTGGTATGTGCCTTCATCAAAATGGCCCCGAGATCCGGCATGGACTGTGGCTTGTTCGCCGAACGACTTGCGTGATGTTCTGGCGTCGCATTTCGAGGCATGGGGAGATCAATAA
PROTEIN sequence
Length: 217
LAVALFDLDGTLLDTVPLITLCFQRMFRKYGNYDISQEAVHEMFGPGESIIFRREFGDLWETVLADYLDCYAKGHDQLAVEPWMMEILKGLRAKGFPLAIITNKERDTTQLTLDHVHLSSYFDVIVTAQDVEHPKPYPDGILKALKTLGATRDEAIFIGDTMNDRDAAKASNVKFVQALWYVPSSKWPRDPAWTVACSPNDLRDVLASHFEAWGDQ*