ggKbase home page

AMDSBA1_56_29 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
oxyR; LysR family transcriptional regulator similarity KEGG
DB: KEGG
49.8 293.0 268 2.10e-69 say:TPY_2599
transmembrane_regions (db=TMHMM db_id=tmhmm from=218 to=240) iprscan interpro
DB: TMHMM
null null null null say:TPY_2599
(db=HMMPfam db_id=PF03466 from=90 to=289 evalue=2.3e-43 interpro_id=IPR005119 interpro_description=LysR, substrate-binding) iprscan interpro
DB: HMMPfam
null null null 2.30e-43 say:TPY_2599
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=88 to=297 evalue=5.4e-41) iprscan interpro
DB: superfamily
null null null 5.40e-41 say:TPY_2599
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=113 evalue=2.5e-26) iprscan interpro
DB: superfamily
null null null 2.50e-26 say:TPY_2599
(db=HMMPfam db_id=PF00126 from=5 to=64 evalue=3.3e-19 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 3.30e-19 say:TPY_2599
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=3 to=89 evalue=7.5e-19 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 7.50e-19 say:TPY_2599
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=166 to=266 evalue=3.3e-15) iprscan interpro
DB: Gene3D
null null null 3.30e-15 say:TPY_2599
HTHLYSR (db=FPrintScan db_id=PR00039 from=41 to=52 evalue=7.5e-06 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 7.50e-06 say:TPY_2599
HTHLYSR (db=FPrintScan db_id=PR00039 from=20 to=31 evalue=7.5e-06 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 7.50e-06 say:TPY_2599
HTHLYSR (db=FPrintScan db_id=PR00039 from=31 to=41 evalue=7.5e-06 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 7.50e-06 say:TPY_2599
HTH_LYSR (db=ProfileScan db_id=PS50931 from=3 to=58 evalue=24.711 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 2.47e+01 say:TPY_2599
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:AEJ40759.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfoba UNIPROT
DB: UniProtKB
49.8 293.0 268 1.00e-68 F8I3F1_SULAT