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SCNpilot_cont_1000_bf_scaffold_676_26

Organism: SCNPILOT_CONT_1000_BF_Mesorhizobium_partial_63_21

partial RP 26 / 55 MC: 1 BSCG 22 / 51 ASCG 9 / 38 MC: 1
Location: comp(22783..25530)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 988.0
  • Bit_score: 1108
  • Evalue 0.0
ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 999.99
  • Bit_score: 1097
  • Evalue 0.0
UPI0003CF90C6 related cluster n=1 Tax=unknown RepID=UPI0003CF90C6 similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 988.0
  • Bit_score: 1108
  • Evalue 0.0

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Taxonomy

Mesorhizobium sp. LSHC414A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2748
ATGCCCAACAAGATGCTCATAGACGCCTCCCACCCGGAGGAAACGCGGGTGGTCGTCACCCGCGGTAACCGTATCGAAGAATTCGATTTCGAATCACAGGACAAGAAGCAACTAAGAGGAAACATCTACCTGGCGCGCGTGACGCGCGTCGAACCCTCGCTTCAGGCCGCGTTTGTCGAATATGGCGGCAACCGTCACGGTTTCCTCGCCTTCAACGAAATCCATCCGGACTACTACCAGATTCCCGTCGCCGACCGGCAGGCCCTGCTCAAGGCGGAGGCTGACGCCGCGGAGGCCGAGGACGCCGAAGAGGATAGCGCCGAGCGCGGCAATGGCCGCCAGCGCCGGCGTGGCGGCAAGGGGCGCGGGCGTGGGCGCCCCGAACAGAGGGCGGCGGAATCGGCTGATACGGCAGAAACCGGCGACGAGAGCCCTTCCGTGGAGGACGAAGCCCAGGCCGTCGAGGCCAATGGTGATGAACACCATGAAGACGGTGGCCCGGCCATGGCCGAAAGCGCTGCCGCCGATGTCGTCTCCGAGGAGATCGAGGCGAATGGTGATGAAACCGCCGGTGACGAGACCGACGGTAACGGTGCCGAAGGCGATGAAGAGCACGACCCCTCGGCCGAACATAACGGAACGGCCTCCGACGAGCACGAAGTCGAGTCGGTCGGCGCGGAGGACGCGCTGGACGAGGCCCAGCATCGGCGCCGCTCCATGCGCCGTACCTACAAGATCCAGGAAGTCATCAAGCGTCGGCAGATCCTGCTCGTTCAGGTCGTCAAGGAGGAGCGCGGCAACAAGGGCGCTGCGCTGACCACCTATCTGTCGCTTGCCGGCCGCTATTCCGTGCTGATGCCCAACACCGCGCGCGGCGGCGGTATCTCCCGCAAGATCACCAACGCACAGGATCGCAAGCGCCTGAAGGATGTCGTCAAGGACCTCGACGTGCCGCAGGGTATGGGGGTCATTCTGCGTACGGCCGGCGAGAACCGCACCAAGGCCGAGATCAAGCGCGACTACGAATATCTGATGCGGCTGTGGGAGAATGTGCGCAGCCTTACCCTGCAATCGACCGCGCCCGCGCTGGTCTATGAGGAAGGCTCGCTCATCAAGCGCTCGGTACGTGATCTCTACAACAAGGATATCGACGAAATCCTTGTTGCAGGCGACGAAGGCTACCGCGAGGCCAAGGATTTCATGCGCATGCTCATGCCGAGCCATGCGAAGGTGGTCCAGCCTTACCGCGACCCGACACCGATCTTCGCGCGGAACGGCATCGAAGCCCAGCTCGACCGGATGCTGCAGCCTCAGGTGACGCTGAAATCGGGCGGCTACATCATCATCAACCAGACTGAGGCGCTGGTCGCCATCGACGTCAACTCCGGACGCTCCACCAAGGAGCATTCGATCGAGGACACGGCGCTGCAGACCAATCTGGAAGCGGCCGATGAAGTGGCGCGGCAGCTCAGGCTGCGCGACCTTGCCGGGCTCGTCGTCATCGACTTCATCGACATGGAGGAGAACCGCAACAACCGGGCGGTGGAGAAGAAGCTCAAGGACTGCCTGAAGAACGACCGGGCGCGCATCCAGGTCGGCCGTATCTCGCATTTCGGCCTGATGGAGATGTCGCGCCAGCGCATCCGAGCGAGCGTGCTGGAATCGACTATGAAGCCCTGCCCGCATTGCGGCGGCACCGGGCATGTGCGCTCCGATTCCTCGACGGCGCTGCATGTCATCCGCGGCATCGAGGAGCACCTCCTGAAGGATGCGCGGCATCACATCACCGTGCGTACGCCGACGGCGACCGCGCTTTACGTGCTCAACCACAAGCGCTCCAGCCTGGTAGAATTGGAGCAGCGTTTCGGCCTTTCGATCGCGGTCGAGGCGGACGACGATGTCGGCATCCAGCACTTTGCCATTACGCGCGGGGCGCCGGCCGAGCCGCGCGATACCGCTGCTCCGGACACGGTCGAGGATACGCCCGCCTTCGAGGCGATGGAGACGGATGACGCCGTCGACGCTGAAGTCGAGGAAACGACCGGACACCATGCCCACGCCGATCACGACGAGGAAGGCGACGCCCACCGCAAGCGTCGCCGCCGGCGGCGGCGCCGCGGCGGCCGGGACCATGGCGACGAGCGCGATCACCATGACGGGCAGCCGCAGACGATCGAGGCCGGAGAAGCGGACGCGGCGGCCGATGACGACGAGCTGGAGGGCACGGAGCGAGAACTGGCGACCGAAGGCGCCGCCGGGGACGAGGCGTCTTCAGCCGAGCAGAAGAAGCGCCGGCGCGGCCGTCGGGGCGGCAAGCGCAACCGCCGCGACCATAGCGAGGATGCGCCCGAACAGGAACTTCAGGGTGACGAGGAGCCTTCCGTCGAGGCGGAAGCCGTGTCGGAGGCATCGATAACGGAAATCGTCGCAAGCGAGGCGCCCGTCGAATCGATGGTAGAGGACACCGAAGTCGCGGCGGAGGAAGCCGCGCCTCAACCGGCCGAAGCGAAAAAGCCGAAGAAGCCGGCTCGCCGCCCGCGCAAGGCCAAGGCCGCGGCAAGCGAACAGTCCGCGATCGCCAACGGCGAAGACCGCCCGGCGGCGGAGAGCCCACCAGAGGAGGAGCCGGTCAAGAGCGCCGAGCCCGAAAAGGAGGAAGCGCCCGTCGAGCCGGTGGTCGTCTCCTCGACCAGCGACGAGGCAAAGCCGCGCAAGACCGGCTGGTGGCAGCGGAAGAGCTTCTTCTGA
PROTEIN sequence
Length: 916
MPNKMLIDASHPEETRVVVTRGNRIEEFDFESQDKKQLRGNIYLARVTRVEPSLQAAFVEYGGNRHGFLAFNEIHPDYYQIPVADRQALLKAEADAAEAEDAEEDSAERGNGRQRRRGGKGRGRGRPEQRAAESADTAETGDESPSVEDEAQAVEANGDEHHEDGGPAMAESAAADVVSEEIEANGDETAGDETDGNGAEGDEEHDPSAEHNGTASDEHEVESVGAEDALDEAQHRRRSMRRTYKIQEVIKRRQILLVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITNAQDRKRLKDVVKDLDVPQGMGVILRTAGENRTKAEIKRDYEYLMRLWENVRSLTLQSTAPALVYEEGSLIKRSVRDLYNKDIDEILVAGDEGYREAKDFMRMLMPSHAKVVQPYRDPTPIFARNGIEAQLDRMLQPQVTLKSGGYIIINQTEALVAIDVNSGRSTKEHSIEDTALQTNLEAADEVARQLRLRDLAGLVVIDFIDMEENRNNRAVEKKLKDCLKNDRARIQVGRISHFGLMEMSRQRIRASVLESTMKPCPHCGGTGHVRSDSSTALHVIRGIEEHLLKDARHHITVRTPTATALYVLNHKRSSLVELEQRFGLSIAVEADDDVGIQHFAITRGAPAEPRDTAAPDTVEDTPAFEAMETDDAVDAEVEETTGHHAHADHDEEGDAHRKRRRRRRRRGGRDHGDERDHHDGQPQTIEAGEADAAADDDELEGTERELATEGAAGDEASSAEQKKRRRGRRGGKRNRRDHSEDAPEQELQGDEEPSVEAEAVSEASITEIVASEAPVESMVEDTEVAAEEAAPQPAEAKKPKKPARRPRKAKAAASEQSAIANGEDRPAAESPPEEEPVKSAEPEKEEAPVEPVVVSSTSDEAKPRKTGWWQRKSFF*