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SCNpilot_expt_500_bf_scaffold_98_27

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 23218..23505

Top 3 Functional Annotations

Value Algorithm Source
DNA binding protein n=3 Tax=Pseudomonas RepID=B7XGM1_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 91.0
  • Bit_score: 103
  • Evalue 1.00e-19
hup; DNA-binding protein HU similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 91.0
  • Bit_score: 103
  • Evalue 3.20e-20
DNA binding protein {ECO:0000313|EMBL:BAC41616.1}; TaxID=53412 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 91.0
  • Bit_score: 103
  • Evalue 1.40e-19

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Taxonomy

Pseudomonas resinovorans → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGAATCGTCAAGAACTGATCGAGCACATCGCCGAGGCCACCGGAGAAACCAAAGCGGCCTCCGGGCGCTTCTTGGATGCCTTCATCAACACCGTTCAAACCGCCGTCGCCTCTGGCGACAAGGTTTCGCTGGTCGGCTTCGGCAGCTTCGAGACGGTATCCACCAAGGCACGTCAGGGCCGTAATCCGGCAACCGGGGACGTGCTGACCATCGACGCCACCGTCCGGCCCAAATTCAGCCCCGGCAGCAACTTCAAGGCGCTGGTGAAGGAAACCTTGGAGAAGTGA
PROTEIN sequence
Length: 96
MNRQELIEHIAEATGETKAASGRFLDAFINTVQTAVASGDKVSLVGFGSFETVSTKARQGRNPATGDVLTIDATVRPKFSPGSNFKALVKETLEK*