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AMDSBA3_2

Alias: AMDSBA3_C1

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA3_2_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1372
-----------------
DNA (1371bp)
protein (457aa)
mod; adenine-specific DNA-methyltransferase
Adenine specific DNA methylase n=1 Tax=Cenarchaeum symbiosum A RepID=A0RWM0_CENSY (db=UNIREF evalue=1.7e-23 bit_score=116.3 identity=45.8 coverage=24.288840262582056)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=26 to=309 evalue=1.3e-32)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=2 to=315 evalue=3.5e-29)
AMDSBA3_2_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1379..3901
-----------------
DNA (2523bp)
protein (841aa)
type III restriction protein res subunit rbh
type III restriction protein res subunit rbh
Restriction endonuclease n=1 Tax=Cenarchaeum symbiosum A RepID=A0RWL9_CENSY (db=UNIREF evalue=1.9e-121 bit_score=442.6 identity=34.3 coverage=97.38406658739595)
AMDSBA3_2_3
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3980..5143
-----------------
DNA (1164bp)
protein (388aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Sulfobacillus acidophilus TPY RepID=F8I6F4_SULAT (db=UNIREF evalue=8.9e-58 bit_score=229.9 identity=75.9 coverage=35.051546391752574)
Uncharacterized protein n=1 Tax=Sulfobacillus acidophilus (strain TPY) RepID=F8I6F4_SULAT
AMDSBA3_2_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5351..6517
-----------------
DNA (1167bp)
protein (389aa)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=175 to=370 evalue=3.1e-45 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=175 to=370 evalue=6.8e-40 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
(db=HMMPfam db_id=PF00589 from=176 to=362 evalue=2.4e-37 interpro_id=IPR002104 interpro_description=Integrase, catalytic GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
no description (db=Gene3D db_id=G3DSA:1.10.150.130 from=70 to=170 evalue=1.1e-14 interpro_id=IPR023109 interpro_description=Integrase/recombinase, N-terminal)
AMDSBA3_2_5
unknown

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comp(6722..6856)
-----------------
DNA (135bp)
protein (45aa)
6722..6856 - ( gc_cont=0.519)
AMDSBA3_2_6
unknown

Not on your lists

comp(6942..7961)
-----------------
DNA (1020bp)
protein (340aa)
Sialidases (db=superfamily db_id=SSF50939 from=207 to=334 evalue=1.5e-09 interpro_id=IPR011040 interpro_description=Neuraminidase)
AMDSBA3_2_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8202..9158
-----------------
DNA (957bp)
protein (319aa)
SerA; phosphoglycerate dehydrogenase and related dehydrogenase
D-lactate dehydrogenase n=18 Tax=Aggregatibacter RepID=G4AAT7_AGGAC (db=UNIREF evalue=1.4e-13 bit_score=82.8 identity=25.9 coverage=67.7115987460815)
D_2_HYDROXYACID_DH_3 (db=PatternScan db_id=PS00671 from=220 to=236 evalue=0.0 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037), Biological Process: oxidation-reduction process (GO:0055114))
2-HYDROXYACID DEHYDROGENASE (db=HMMPanther db_id=PTHR10996 from=33 to=313 evalue=3.6e-80)
AMDSBA3_2_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9779..10312
-----------------
DNA (534bp)
protein (178aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Megasphaera sp. UPII 135-E RepID=F9MP53_9FIRM (db=UNIREF evalue=7.3e-15 bit_score=86.3 identity=32.5 coverage=87.64044943820225)
seg (db=Seg db_id=seg from=1 to=14)
(db=HMMPfam db_id=PF03717 from=43 to=165 evalue=4.5e-20 interpro_id=IPR005311 interpro_description=Penicillin-binding protein, dimerisation domain GO=Molecular Function: penicillin binding (GO:0008658))
AMDSBA3_2_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10350..11669
-----------------
DNA (1320bp)
protein (440aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 n=2 Tax=Sulfobacillus acidophilus RepID=G8TWX1_9FIRM (db=UNIREF evalue=1.7e-166 bit_score=591.3 identity=66.1 coverage=96.5909090909091)
seg (db=Seg db_id=seg from=107 to=122)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=26 to=406 evalue=2.1e-67 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
AMDSBA3_2_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11793..12152)
-----------------
DNA (360bp)
protein (120aa)
11793..12152 - ( gc_cont=0.653)
Uncharacterized protein n=5 Tax=Sulfobacillus acidophilus RepID=F8IC05_SULAT
AMDSBA3_2_11
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12458..13771)
-----------------
DNA (1314bp)
protein (438aa)
mandelate racemase/muconate lactonizing protein
mandelate racemase/muconate lactonizing protein
Mandelate racemase n=1 Tax=Caligus clemensi RepID=C1C1W7_9MAXI (db=UNIREF evalue=4.1e-128 bit_score=463.8 identity=50.8 coverage=97.71689497716895)
AMDSBA3_2_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14170..15492)
-----------------
DNA (1323bp)
protein (441aa)
codA; cytosine deaminase
codA; cytosine deaminase
Cytosine deaminase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JFI4_9ALTE (db=UNIREF evalue=3.4e-90 bit_score=337.8 identity=46.6 coverage=85.71428571428571)
AMDSBA3_2_13
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15494..16936)
-----------------
DNA (1443bp)
protein (481aa)
cytosine/purines uracil thiamine allantoin permease
Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EL09_SCLS1 (db=UNIREF evalue=3.2e-25 bit_score=122.1 identity=25.3 coverage=92.3076923076923)
seg (db=Seg db_id=seg from=116 to=131)
transmembrane_regions (db=TMHMM db_id=tmhmm from=211 to=233)
AMDSBA3_2_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17053..17307)
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein
Uncharacterized protein n=5 Tax=Sulfobacillus acidophilus RepID=F8IC05_SULAT
AMDSBA3_2_15
unknown

Not on your lists

17369..17542
-----------------
DNA (174bp)
protein (58aa)
17369..17542 + ( gc_cont=0.598)
AMDSBA3_2_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17910..19271
-----------------
DNA (1362bp)
protein (454aa)
broad-specificity cellobiase (EC:3.2.1.21)
broad-specificity cellobiase (EC:3.2.1.21)
Thermostable beta-glucosidase B n=1 Tax=Thermobispora bispora RepID=BGLB_THEBI (db=UNIREF evalue=1.4e-110 bit_score=405.6 identity=49.6 coverage=95.15418502202643)
AMDSBA3_2_17
Gracilibacillus halophilus, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20220..20363
-----------------
DNA (144bp)
protein (48aa)
20220..20363 + ( gc_cont=0.576)
Uncharacterized protein n=1 Tax=Gracilibacillus halophilus YIM-C55.5 RepID=N4WAA8_9BACI
AMDSBA3_2_18
Candidatus Acidianus copahuensis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(21068..22033)
-----------------
DNA (966bp)
protein (322aa)
agmatinase
Arginase n=2 Tax=Bilophila RepID=E5Y216_BILWA (db=UNIREF evalue=1.4e-64 bit_score=252.3 identity=42.1 coverage=94.72049689440993)
no description (db=Gene3D db_id=G3DSA:3.40.800.10 from=7 to=319 evalue=7.3e-90 interpro_id=IPR023696 interpro_description=Ureohydrolase domain)
Arginase/deacetylase (db=superfamily db_id=SSF52768 from=2 to=318 evalue=3.9e-89)
AMDSBA3_2_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22061..23497)
-----------------
DNA (1437bp)
protein (479aa)
amino acid/polyamine/organocation transporter
Putative uncharacterized protein n=1 Tax=Sulfolobus solfataricus P2 RepID=Q97U39_SULSO (db=UNIREF evalue=1.3e-21 bit_score=110.2 identity=25.6 coverage=70.35490605427975)
transmembrane_regions (db=TMHMM db_id=tmhmm from=167 to=189)
transmembrane_regions (db=TMHMM db_id=tmhmm from=209 to=231)
AMDSBA3_2_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23987..25126)
-----------------
DNA (1140bp)
protein (380aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LRE7_ACIC1 (db=UNIREF evalue=7.6e-70 bit_score=270.0 identity=45.9 coverage=82.10526315789474)
seg (db=Seg db_id=seg from=24 to=36)
AMDSBA3_2_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25551..26573
-----------------
DNA (1023bp)
protein (341aa)
L-aminopeptidase DmpA
Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SPM0_BOTFB (db=UNIREF evalue=6.4e-44 bit_score=183.7 identity=35.5 coverage=97.94721407624634)
seg (db=Seg db_id=seg from=307 to=317)
seg (db=Seg db_id=seg from=244 to=259)
AMDSBA3_2_22
unknown

Not on your lists

26607..27251
-----------------
DNA (645bp)
protein (215aa)
seg (db=Seg db_id=seg from=32 to=48)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=27 evalue=5.0)
AMDSBA3_2_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27469..28731)
-----------------
DNA (1263bp)
protein (421aa)
divalent cation-transport integral membrane protein
Divalent cation-transport integral membrane protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I6X2_SULAT (db=UNIREF evalue=3.5e-132 bit_score=477.2 identity=59.3 coverage=94.29928741092637)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=382)
AMDSBA3_2_24
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28921..30858
-----------------
DNA (1938bp)
protein (646aa)
peptidase S9 prolyl oligopeptidase active site domain-containing protein
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9, prolyl oligopeptidase active site region n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNQ0_NEPCE (db=UNIREF evalue=3.8e-98 bit_score=364.8 identity=35.3 coverage=95.3560371517028)
AMDSBA3_2_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30962..32683)
-----------------
DNA (1722bp)
protein (574aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=4 to=24)
seg (db=Seg db_id=seg from=466 to=481)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=33 to=573 evalue=6.4e-72)
AMDSBA3_2_26
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32848..34971)
-----------------
DNA (2124bp)
protein (708aa)
peptidase S9 prolyl oligopeptidase active site domain-containing protein
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Putative peptidase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCZ8_BREBN (db=UNIREF evalue=2.7e-81 bit_score=308.9 identity=30.1 coverage=92.65536723163842)
AMDSBA3_2_27
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34955..36178)
-----------------
DNA (1224bp)
protein (408aa)
membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=207 to=229)
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=256)
transmembrane_regions (db=TMHMM db_id=tmhmm from=268 to=287)
AMDSBA3_2_28
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(36893..38194)
-----------------
DNA (1302bp)
protein (434aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Aminotransferase n=1 Tax=Scheffersomyces stipitis CBS 6054 RepID=A3GGP3_PICST (db=UNIREF evalue=9.9e-74 bit_score=283.1 identity=35.8 coverage=96.54377880184332)
seg (db=Seg db_id=seg from=74 to=90)
seg (db=Seg db_id=seg from=51 to=63)
AMDSBA3_2_29
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

comp(38191..38937)
-----------------
DNA (747bp)
protein (249aa)
acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit
Coenzyme A transferase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DHF5_9RHIZ (db=UNIREF evalue=1.0e-43 bit_score=182.6 identity=41.5 coverage=93.97590361445783)
no description (db=Gene3D db_id=G3DSA:3.40.810.20 from=6 to=237 evalue=6.5e-63)
NagB/RpiA/CoA transferase-like (db=superfamily db_id=SSF100950 from=5 to=238 evalue=3.2e-58)
AMDSBA3_2_30
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(38930..39808)
-----------------
DNA (879bp)
protein (293aa)
catI; 3-oxoadipate:succinyl-CoA transferase subunit B
Glutaconate CoA-transferase, subunit A n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJB8_SACEN (db=UNIREF evalue=2.5e-28 bit_score=131.7 identity=34.2 coverage=79.86348122866895)
no description (db=Gene3D db_id=G3DSA:3.40.1080.10 from=2 to=285 evalue=1.1e-72)
NagB/RpiA/CoA transferase-like (db=superfamily db_id=SSF100950 from=2 to=288 evalue=6.4e-69)
Displaying items 1-30 of 127 in total

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