ggKbase home page

AMDSBA3_9_9

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(8505..8930)

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=12 to=24) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=140 evalue=6.0e-28) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.00e-28
no description (db=HMMSmart db_id=SM00347 from=23 to=123 evalue=2.0e-16 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.00e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 426
ATGAGATTGGCTACCGAAATATTCGATCAGATTTTTGTCGTGGTCCGAGATTTTGAGCGTCGGTTTCGGGAACAAGGGTCGGGCACGTTATCCACGACGCAATTTCAAGCTTTGTCTATCCTGGAAGAATCCGAGCCGGTGACGGCGATGACGATGGCACAGAAATTGCGCATTGCGCCACCCACCGCCACGCGGGCACTCGATTCCTTAGGACGTCGACAACTGGTGTTGAAAGAGCGCGATCCCCAGGATCGCCGCATTGTATGGCTCAGGCTGACAGATAGGGGGGAACATGCATTGCTCAAGGAGCGCGAGCATCAACTCGCATGGATGGTTAACTTGCTGGATGCGCTGACCCGTGATGAACAGGAGCAGTTCTTGGACTTAATGCGGAAAATCGCATCCCGGGTGGATTCACCCTCGTGA
PROTEIN sequence
Length: 142
MRLATEIFDQIFVVVRDFERRFREQGSGTLSTTQFQALSILEESEPVTAMTMAQKLRIAPPTATRALDSLGRRQLVLKERDPQDRRIVWLRLTDRGEHALLKEREHQLAWMVNLLDALTRDEQEQFLDLMRKIASRVDSPS*