ggKbase home page

AMDSBA3_18_21
Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
oxyR; LysR family transcriptional regulator similarity KEGG
DB: KEGG
36.3 295.0 185 3.20e-44 say:TPY_2599
Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW97_9CLOT (db=UNIREF evalue=3.2e-21 bit_score=108.2 identity=25.9 coverage=91.42857142857143) similarity UNIREF
DB: UNIREF
25.9 91.43 108 3.20e-21 say:TPY_2599
seg (db=Seg db_id=seg from=35 to=48) iprscan interpro
DB: Seg
null
null
null
null
say:TPY_2599
(db=HMMPfam db_id=PF03466 from=88 to=290 evalue=5.6e-43 interpro_id=IPR005119 interpro_description=LysR, substrate-binding) iprscan interpro
DB: HMMPfam
null
null
null
5.61e-43 say:TPY_2599
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=82 to=302 evalue=6.5e-42) iprscan interpro
DB: superfamily
null
null
null
6.50e-42 say:TPY_2599
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=89 evalue=5.0e-23) iprscan interpro
DB: superfamily
null
null
null
5.00e-23 say:TPY_2599
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=87 evalue=4.0e-20 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null
null
null
4.00e-20 say:TPY_2599
(db=HMMPfam db_id=PF00126 from=3 to=62 evalue=4.4e-20 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null
null
null
4.40e-20 say:TPY_2599
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=167 to=267 evalue=4.4e-13) iprscan interpro
DB: Gene3D
null
null
null
4.40e-13 say:TPY_2599
HTHLYSR (db=FPrintScan db_id=PR00039 from=18 to=29 evalue=1.1e-05 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null
null
null
1.10e-05 say:TPY_2599
HTHLYSR (db=FPrintScan db_id=PR00039 from=29 to=39 evalue=1.1e-05 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null
null
null
1.10e-05 say:TPY_2599
HTHLYSR (db=FPrintScan db_id=PR00039 from=39 to=50 evalue=1.1e-05 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null
null
null
1.10e-05 say:TPY_2599
HTH_LYSR (db=ProfileScan db_id=PS50931 from=1 to=58 evalue=30.481 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null
null
null
3.05e+01 say:TPY_2599
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:AEJ40759.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfoba UNIPROT
DB: UniProtKB
36.3 295.0 185 1.60e-43 F8I3F1_SULAT
Transcriptional regulator, LysR family protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I3F1_SULAT similarity UNIREF
DB: UNIREF90
36.3
null
183 8.00e-44 say:TPY_2599