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AMDSBA3_21_6

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 2126..2476

Top 3 Functional Annotations

Value Algorithm Source
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=2 to=103 evalue=2.5e-16) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.50e-16
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=103 evalue=3.3e-13 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.30e-13
no description (db=HMMSmart db_id=SM00418 from=5 to=99 evalue=1.3e-06 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-06

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Taxonomy

Sanguibacter keddieii → Sanguibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 351
GTGGATGCAGTCGCGATTTTTAAAGCTTTGGGGCAACCGCAACGGTATGCGCTCTTTCTCGACCTGCTTCAAGGAGAAGGAACCTCTTGCTGTGTGGATGTTGCGCCGGGCGAACCCGCGTGTTGTGTCATCGATTTCACCCAGCGACATCGCTTGGCGCAGTCGACTATCTCGCATCATTTGCAAGTGTTGGTGGACACGGGATTAGTGACCGTCGAACGCCGAGGCACATATCGGGTCTACGCCGTCAATCAGCCGCTATGGACCGCATTTCAACGCTACGTGGCGGGGTTAACGCTCTGTGCTGATGCAGAAGACCGACGGGCTATGGGGAAGATCCCCCAGGCATAA
PROTEIN sequence
Length: 117
VDAVAIFKALGQPQRYALFLDLLQGEGTSCCVDVAPGEPACCVIDFTQRHRLAQSTISHHLQVLVDTGLVTVERRGTYRVYAVNQPLWTAFQRYVAGLTLCADAEDRRAMGKIPQA*