ggKbase home page

AMDSBA3_26_21

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(17821..18489)

Top 3 Functional Annotations

Value Algorithm Source
vicR; two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 220.0
  • Bit_score: 227
  • Evalue 3.10e-57
Two component transcriptional regulator, winged helix family n=1 Tax=Planctomyces brasiliensis DSM 5305 RepID=F0SNU4_PLABD (db=UNIREF evalue=6.9e-47 bit_score=193.0 identity=47.6 coverage=98.65470852017937) similarity UNIREF
DB: UNIREF
  • Identity: 47.6
  • Coverage: 98.65
  • Bit_score: 193
  • Evalue 6.90e-47
TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE REGULATOR (INTESTINAL BACTERIA - BACTEROIDES THETAIOTAOMICRON) (db=HMMPanther db_id=PTHR23283:SF21 from=1 to=121 evalue=1.8e-36) iprscan interpro
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 669
ATGCAGCGAACGATTCTTGTCGTGGACGACGAGCCTTCCATCTTAACCCTCATTCGTCACCGTCTTGAACATGACGGATTGCGGGTGCTAACCGCAGGCGACGGACTGTCGGCGCTCCAGCGAATTTCTGCCGACACCCCCGACCTCTTGGTGTTGGATCTGATGCTGCCCGGCATGCCCGGTCTCGAAGTACTGCGCACCATGCGGCAGTTTTCGGCCATTCCCGTGATTTTGCTAAGCGCGCGCAACGACGAAGTAGACCGAGTCGTCGGCCTGGAGATGGGTGCCGACGACTACGTCACGAAACCGTTCTCGGTGCGCGAACTGGCTGCTCGAGTTAAGGCGGTCTTTCGCCGTCAGGAGCTTAGGAACGAAACCGGTCGACTCGTTGTTCACGAGGTCAGCGTGAACTTGGCGGAGCGTTCAGTCAGCGTCCAAGGTCAGGTCGTCGCGCTCACCACGACTGAGTTTGAAATTTTAACGCTCTTAATGCGCAATCCCGGACGCGTGTTTTCGCGCGAGGAATTGTTTCGCCAGGTCTGGAACTACGAGGTGGCCGCCGATACGCGCACCATCAATGTTCATATTAAAAATTTGCGAGGAAAACTGCAGGCCGAAGCATCTCTCATTGAAACCGTGCGGGGCGTCGGATATCGGATACGTCCGTAA
PROTEIN sequence
Length: 223
MQRTILVVDDEPSILTLIRHRLEHDGLRVLTAGDGLSALQRISADTPDLLVLDLMLPGMPGLEVLRTMRQFSAIPVILLSARNDEVDRVVGLEMGADDYVTKPFSVRELAARVKAVFRRQELRNETGRLVVHEVSVNLAERSVSVQGQVVALTTTEFEILTLLMRNPGRVFSREELFRQVWNYEVAADTRTINVHIKNLRGKLQAEASLIETVRGVGYRIRP*