ggKbase home page

AMDSBA3_30_17

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(14010..15869)

Top 3 Functional Annotations

Value Algorithm Source
EmrB/QacA subfamily drug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 556.0
  • Bit_score: 605
  • Evalue 1.50e-170
Permease, major facilitator superfamily n=3 Tax=Thermococcus RepID=C5A763_THEGJ (db=UNIREF evalue=4.4e-43 bit_score=181.8 identity=27.8 coverage=69.83870967741936) similarity UNIREF
DB: UNIREF
  • Identity: 27.8
  • Coverage: 69.84
  • Bit_score: 181
  • Evalue 4.40e-43
transmembrane_regions (db=TMHMM db_id=tmhmm from=390 to=412) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrolancea hollandica → Nitrolancea → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1860
ATGGCCGTGAATAACCCAGCGGGGAATGCGACCGTGGGGAGACGCTCGCAGCCGCTCGATCCGTCTAAGGGGCTGCGTTCTCAGGTGAGCCGCGAGCGGCTCGTCCTGATTCTCATTAGTACAATGCTGGGCATGCTGTTGTTCGCGGTTGACCAGACCGTGGTCGGGACGGCTATGCCGCGGATTGTTGCAGATTTAAACGGGCTTAAAGAATACGCCTGGGTTACGACCGCCTATCTTTTGACGTCCACCGTGGGAGTGCCCTTATACGGCAAGTTGTCCGACATTTATGGACGCAAACCCTTTTACCTTTTCGGCATGTTTGTGTTTGTGCTGGGATCCGCATTGTCCGGCCAATCTCACAACATGACGCAGCTGATTTTGTTTCGCGGACTGCAAGGATTGGGTGGCGGCGCGCTAATGCCGATTGCCATTGCCATTATTGGCGACATTTTTCCGCCGTCGGAGCGGGGCAAATGGCAAGGACTGCTGATGGCGGTGTTTGGCTTTGCCTCAATCCTGGGGCCGTGGGCGGGAGGCGCCATCACCGATCACTGGGGTTGGCGTTACGTCTTTTATGTCAATTTGCCGATTGGCATTATCGCCTTAATCTTCTGTGCGTTCGCCTTTCCTAGCGTCTATCGCCGCGCGCAGCACGTGATTGACTGGTGGGGCACTACGATTTTGGTCATTGCTGCCACGCCTATGCTCCTAAGTTTTTCGTGGGCCGGCAACGAGTACACCTGGGGCAATTGGCATGTATTAGGCGGTTTCGCCTTATCGGCGGTGGCATGGGTGGTCTTTATTTTCTGGGAGATGCGCCACAAAGAACCGATTGTCGAGCCACGGTTATTTAAGAATAGTATTTACGCGGTGAGCGTGCTGGCCTCTTTTATGGTGTCGGCAGGGATGTTTGGGGCGATTATGTTCATCCCGCTCTTTACACAGGCGGTGGTGGGAGACTCCCCGTCCAATTCCGGGATCGTATTAACTCCGATGATGTTGGGGTTTATGGTCTCCAGCATTATCGGCGGCCAAATTTTGTCGCGCACCGGTCGCTATAAGGCCTTGGCCATTATCACCATGGCGATCGCCATTGTTGGAATGTTGCTCTTGTCACGCATGCACGCCGACGCGACAAACGCTGTCGTCATCCGCAACATGGTGATTACGGGTCTGGGCATGGGCACAGGAATGAGCCTTTTCACCATTGTCGTGCAAAACGCGTTCCCGTTTCGGATGATGGGCGCTGTAACCGCACAGTTGCAATTCTTCCGTTCGATTGGCAGCACCGTCGGACTGGCCGTGTTCGGCTCATTTGTCACAGCCCATTTTACCCACGAACTACCCAAGCAAATCCCGGCGGCAGTGCTCAAGGTGGTGCCCAAGCACGCGCTCTCCAGCATCTCCAACCCGTCGGTGTTGTTAACCTCGTCGGCGTCGACGCAACTCTCGCGCAGCTTTGCGAAGTTTGGGCCACAAGGCGCGGCACTGGCGCACGAGCTGTTGCACGGCGTCAAGGTTGCATTGGCGTTGTCCACCGACCGCGTTTTCTTTCTTGGAAGCCTGCTGCTGGCAGCCGCGTTGCTGACCTTGTTCTTCTTGCGCGAAATTGAGTTGAAAAAGGTGACTGGGGACGTCGTGGCCGAAGCGCCGTCGGGTCCGTCACTGAACCGCGCTGAGGCGCGAGCCGTCTTGGGCCTAGTCTTGGCCAAGCGGGCTGCCACCGGTGGGTTTGGCGATGAAGGCGAGCGCCGTCAGGCGCGCCAGGTGGCGGCGCAGTTGTTGGCACAATACCTAGCCTATCAAAATGCGCTGTCGGTTGGCGAGGCGGAGATGGCTGCAACCAAAGATTCCTGA
PROTEIN sequence
Length: 620
MAVNNPAGNATVGRRSQPLDPSKGLRSQVSRERLVLILISTMLGMLLFAVDQTVVGTAMPRIVADLNGLKEYAWVTTAYLLTSTVGVPLYGKLSDIYGRKPFYLFGMFVFVLGSALSGQSHNMTQLILFRGLQGLGGGALMPIAIAIIGDIFPPSERGKWQGLLMAVFGFASILGPWAGGAITDHWGWRYVFYVNLPIGIIALIFCAFAFPSVYRRAQHVIDWWGTTILVIAATPMLLSFSWAGNEYTWGNWHVLGGFALSAVAWVVFIFWEMRHKEPIVEPRLFKNSIYAVSVLASFMVSAGMFGAIMFIPLFTQAVVGDSPSNSGIVLTPMMLGFMVSSIIGGQILSRTGRYKALAIITMAIAIVGMLLLSRMHADATNAVVIRNMVITGLGMGTGMSLFTIVVQNAFPFRMMGAVTAQLQFFRSIGSTVGLAVFGSFVTAHFTHELPKQIPAAVLKVVPKHALSSISNPSVLLTSSASTQLSRSFAKFGPQGAALAHELLHGVKVALALSTDRVFFLGSLLLAAALLTLFFLREIELKKVTGDVVAEAPSGPSLNRAEARAVLGLVLAKRAATGGFGDEGERRQARQVAAQLLAQYLAYQNALSVGEAEMAATKDS*