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AMDSBA3_30_18

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(15856..16329)

Top 3 Functional Annotations

Value Algorithm Source
HTH_MARR_1 (db=PatternScan db_id=PS01117 from=68 to=103 evalue=0.0 interpro_id=IPR023187 interpro_description=Transcriptional regulator MarR-type, conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=6 to=142 evalue=8.1e-22) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.10e-22
no description (db=HMMSmart db_id=SM00347 from=30 to=129 evalue=6.3e-13 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.30e-13

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Taxonomy

Sphaerobacter thermophilus → Sphaerobacter → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 474
GTGGATAAGACTCGGCTTGAGACGCGTGCCGACACCACATTAGAACTCATGCGGGAAATCTTTCGCGGGTTGTCGCAACCCCAAGACGAGGCCTGGCTTCACACCGAATTGTCCATGGCGCAAGTGAAAGCGTTGCTGGCCATTGGCAAGGATGGGGATCCTTCCATTGGTGTGGTGGCCAAAGAACTGAATGTGGGTCTATCAGCTGCCAGTCAAATTGTAGAGAGGTTGGTGCGGGCCGGCCTGGTGGAGCGTCGTCCGCATCCGCACGACCGCCGTGTGACCCAGTGTGTGTTGAGTGCTGAGGGGGATCATATGTTAAGCAGCTTTCAGCGAGGTCCGCGCCTATTGCGGGAGCGCTTGCAAAGTATGGATCCGCAGGATTTGCGGTGTTTAGAACAAGGGCTGACCGCATTAGCCAAAGCAATACGGCATGGCGGGCATGAAGGGGAGGATAGCGATGGCCGTGAATAA
PROTEIN sequence
Length: 158
VDKTRLETRADTTLELMREIFRGLSQPQDEAWLHTELSMAQVKALLAIGKDGDPSIGVVAKELNVGLSAASQIVERLVRAGLVERRPHPHDRRVTQCVLSAEGDHMLSSFQRGPRLLRERLQSMDPQDLRCLEQGLTALAKAIRHGGHEGEDSDGRE*