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AMDSBA3_32_20

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 22355..23215

Top 3 Functional Annotations

Value Algorithm Source
squalene synthase (EC:2.5.1.32) similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 285.0
  • Bit_score: 274
  • Evalue 3.70e-71
Putative squalene/phytoene synthase n=1 Tax=Streptomyces hygroscopicus subsp. jinggangensis 5008 RepID=H2JTK0_STRHJ (db=UNIREF evalue=1.3e-21 bit_score=109.4 identity=34.3 coverage=80.13937282229965) similarity UNIREF
DB: UNIREF
  • Identity: 34.3
  • Coverage: 80.14
  • Bit_score: 109
  • Evalue 1.30e-21
HpnC: squalene synthase HpnC (db=HMMTigr db_id=TIGR03464 from=21 to=285 evalue=3.1e-90 interpro_id=IPR017827 interpro_description=Squalene synthase HpnC) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.10e-90

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Taxonomy

Alicyclobacillus acidocaldarius → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 861
ATGAGTATGGCAACCACGATGTTGGACGGACGCGACGACGAGTTTCGGCTGTGCGAAACGATCGCACGCCAACACTATGAAAACTTTAGTGTCCTCTCCGCGTTTGTTCCAGGTTCGCTGCGCCCTCATCTGAGTGCCATCTATGCCTTTTGCCGCGGCGTCGACGACCTCGGCGACGAATTGGCCGGAGACCGGCGACGCGCTCTGACCAAGTGGCGCAACCAACTGGACCGCACCTTCGCGGGCAGTCCCGAACACCCTGTCTTTCGCGCGTTGGGAGTGACCATCGAACGGTTTTCTCTCCCATACGAGGAATTTGACAAACTGATTCGCGCCAATGAGATGGATCAGGAAGCGAGACGGTATGAAACATTCGCGGACACACTCAATTACTGTGTATACTCAGCCAATCCGGTCGGTCGCTTAGTGCTGGGTCTTTTTGGCTGTGCTGACCCCAAACGGCTGGCGCTCTCCGATGCGATTTGCACGGGTCTGCAATTGGCTAATTTTTTGCAGGATTTGCCGACTGATCTAGCGCGAGGGCGCAGCTACTGGCCCGAAGAAGATTATCGACAGTTTGATCTGTCCTCGGATGAGTTAGCCAAGAAAGGAGGCGACGCCCATCAGATTCAGTCATGGACCCGTTTTGAAGCAGAACGAACCCTTCAATATTTTCGGCAGGGGCGTCCTTTAGAACACGCGGTGCCGTGGCGTTTGGGGCGACAGTTGGCGCTATACCGGCTAGGCGGCGAAGCCGTGGTTGAAGCGATCTTGCTCCAGGGCGCCAATCCCTGGAACGGTCGGCCAACCGTTTCGCACTGGCGCAAGCTGCAACTGATGGTCCAAGTGCTTACGGCCTAA
PROTEIN sequence
Length: 287
MSMATTMLDGRDDEFRLCETIARQHYENFSVLSAFVPGSLRPHLSAIYAFCRGVDDLGDELAGDRRRALTKWRNQLDRTFAGSPEHPVFRALGVTIERFSLPYEEFDKLIRANEMDQEARRYETFADTLNYCVYSANPVGRLVLGLFGCADPKRLALSDAICTGLQLANFLQDLPTDLARGRSYWPEEDYRQFDLSSDELAKKGGDAHQIQSWTRFEAERTLQYFRQGRPLEHAVPWRLGRQLALYRLGGEAVVEAILLQGANPWNGRPTVSHWRKLQLMVQVLTA*