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AMDSBA3_37_6 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
transcription elongation factor GreA similarity KEGG
DB: KEGG
84.1 157.0 260 3.90e-67 sap:Sulac_0220
Transcription elongation factor GreA n=2 Tax=Sulfobacillus acidophilus RepID=G8TWU3_9FIRM (db=UNIREF evalue=4.2e-67 bit_score=259.6 identity=84.1 coverage=98.73417721518987) similarity UNIREF
DB: UNIREF
84.1 98.73 259 4.20e-67 sap:Sulac_0220
coiled-coil (db=Coil db_id=coil from=13 to=34 evalue=NA) iprscan interpro
DB: Coil
null null null null sap:Sulac_0220
coiled-coil (db=Coil db_id=coil from=50 to=71 evalue=NA) iprscan interpro
DB: Coil
null null null null sap:Sulac_0220
GREAB_1 (db=PatternScan db_id=PS00829 from=19 to=50 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: PatternScan
null null null 0.0 sap:Sulac_0220
GREAB_2 (db=PatternScan db_id=PS00830 from=122 to=138 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: PatternScan
null null null 0.0 sap:Sulac_0220
greA: transcription elongation factor GreA (db=HMMTigr db_id=TIGR01462 from=7 to=157 evalue=3.9e-62 interpro_id=IPR006359 interpro_description=Transcription elongation factor GreA GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: HMMTigr
null null null 3.90e-62 sap:Sulac_0220
(db=HMMPfam db_id=PF03449 from=5 to=76 evalue=1.6e-26 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: HMMPfam
null null null 1.60e-26 sap:Sulac_0220
GreA transcript cleavage protein, N-terminal domain (db=superfamily db_id=SSF46557 from=4 to=81 evalue=4.5e-26 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: superfamily
null null null 4.50e-26 sap:Sulac_0220
(db=HMMPfam db_id=PF01272 from=84 to=157 evalue=1.4e-24 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: HMMPfam
null null null 1.40e-24 sap:Sulac_0220
no description (db=Gene3D db_id=G3DSA:1.10.287.180 from=3 to=77 evalue=2.6e-22 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: Gene3D
null null null 2.60e-22 sap:Sulac_0220
FKBP-like (db=superfamily db_id=SSF54534 from=81 to=156 evalue=3.2e-20) iprscan interpro
DB: superfamily
null null null 3.20e-20 sap:Sulac_0220
no description (db=Gene3D db_id=G3DSA:3.10.50.30 from=77 to=156 evalue=5.0e-18 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: Gene3D
null null null 5.00e-18 sap:Sulac_0220
GreA_GreB (db=HAMAP db_id=MF_00105 from=3 to=157 evalue=23.124 interpro_id=IPR023459 interpro_description=Transcription elongation factor GreA/GreB GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: HAMAP
null null null 2.31e+01 sap:Sulac_0220
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1051632 species="Bacteri UNIPROT
DB: UniProtKB
84.1 157.0 260 2.00e-66 F8I507_SULAT