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AMDSBA3_44_11

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 8755..9339

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 195.0
  • Bit_score: 197
  • Evalue 3.90e-48
Pseudouridine synthase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L028_THERP (db=UNIREF evalue=2.1e-07 bit_score=61.6 identity=34.2 coverage=54.871794871794876) similarity UNIREF
DB: UNIREF
  • Identity: 34.2
  • Coverage: 54.87
  • Bit_score: 61
  • Evalue 2.10e-07
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=5 to=114 evalue=1.6e-13 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.60e-13

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 585
ATGGATAAAACACCCCAGCTTCCCATTACCCCGATGGCACTGGATCTGTGGTATGAGGGACCTGGTTTCGTGGTCGCGGACAAACCCCAAGGTATGGCGGTGCATCCCGATCGAGCCGACGGTGAGGGTACCTTGGTCAACGGATTGTTGCAATCGAACCGTTGGCTCGCAGAAATGGAAACCAGCCATGCTCCCGGTGTGATTCACCGACTCATGGCACAAGACCGGGGGTTAGTTTTAGTCGCCAAGTCCGAGGACATGGCCGAGGCGCTACGCGGACTTTACCGTGAGCAAGCCATTACGTTTTCCTATCGCGTTCGCATAGCTAAAGACGTAAGGCCTGTGGCAACGGAACTGGTGACCGTCTTTGGTCATCAAGTCTATGACGATGTCTCGGTGTGGGATATTGACAGCCCGCTCGGCGATACCGAGCAATTGCGGAGCGAGTGGTTGGGTGAGGTCAGCCGTGACGCGTATTTCGTAGCATACCGGATGGACATTCCGGCGCCGCGCACGCACATTCAGGTGGGATTGGGCGAACGGATCGGGCTTCCTGCCATAGACCTCTACACCGTTCCGACGTGA
PROTEIN sequence
Length: 195
MDKTPQLPITPMALDLWYEGPGFVVADKPQGMAVHPDRADGEGTLVNGLLQSNRWLAEMETSHAPGVIHRLMAQDRGLVLVAKSEDMAEALRGLYREQAITFSYRVRIAKDVRPVATELVTVFGHQVYDDVSVWDIDSPLGDTEQLRSEWLGEVSRDAYFVAYRMDIPAPRTHIQVGLGERIGLPAIDLYTVPT*