ggKbase home page

AMDSBA3_51_18

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(14668..16056)

Top 3 Functional Annotations

Value Algorithm Source
cusS; signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 456.0
  • Bit_score: 553
  • Evalue 5.10e-155
  • rbh
Sensor histidine kinase/response regulator n=2 Tax=Prevotella bivia RepID=D1XY87_9BACT (db=UNIREF evalue=5.3e-25 bit_score=121.3 identity=28.7 coverage=69.76241900647948) similarity UNIREF
DB: UNIREF
  • Identity: 28.7
  • Coverage: 69.76
  • Bit_score: 121
  • Evalue 5.30e-25
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1389
GTGAACCGACTGCGACGGCGCACTCTGGTCAACCAGTTGATTGGACGCCAAGTCGCCCTTTTAGCGATTTTGCTCTTTGTCGTCGGCGTCAGTCAGTACCTCATCTTACGCGCCGTGCTCTTTGCCTCCACCGCTAAGACCTTGGGCAATGAAATCGCGGTGTTAACGCCCGTGGTGCATCATACGTTGGCTAATCGTGGCATTGCCGGATTCCAACACATTGCCGACATCATGGTGGCCCGGCTACGTTCACCAGGCGTCGAAGTGGTAATCACCAACGCACTAGGCCAAGTCATTGCAGCCTCCACCAATTTGCACGCCAAGCTCCCGCCACTGTACAACTCGCCCTACTTCATCTGGAATCAGCGCCTCGTGGTCAACCGGGTCATTGGCAACGTATACTATCCCAGCGGGTACGTCTGGCTGCTCTCGTCGACGCGGCCCATCCATAGCATCTTAAGCCGTGACGCCGTTCTCTATGTTTTTTTGGCCGTCCTGAGTCTAGTTGTTGCCGGCTGGCTCGGGTCCCTATCGGTCCGGCAAACTTTGCATCCGCTGGAACAAATTCGGCAAATGACTCAGCGCATCGCCTCCGGAGAATTCGGCCACGCTACGCGCATTGACAATGCGCCGGCGGAACTTCAAGATCTGGGCGAGTCCATCGATCGGATGTCCGAATCCATTCAGGCTCTGTTTTCTCAGGAAAAGGCTTTATCCGAGCAAATGCGCCGCTTTGTGGCTGATGCATCCCACGAGTTGCGCACGCCCTTAACCGCCATTACCGGATTTTTAGATCTCATGTCGCACGGCGAATTGACCCCGGATGAACAAGAACGAGGGCTTCGCGCCATCCAGGCGCAGGGGCGACGGATGGGGCGGCTCGTCAATCAATTGCTGATGCTGTCTCGTATGGATAGCGCGCCCGAATCACACTTAACCTTACAGCCGATTCGTTTGGATCGTTGGCTGAACGACTTGTCCCCCGAGATTTACAATTTGGTCGATCCCCGTCCGGTGACCATGATGGTCGCGCCTGTGACCGCGCGGGTCGACCCTGATCGCTTGACGCAAGTTGTCACCAACCTCTTGGAAAACATCCGCTCTTATACGCCGGACGACACCGCAGTCCGCATCACGGTGGGAATGGCCCACGGGTCGGTCGTCATGCAGATCGAAGATAACGGGCCGGGCATCCCCCCCGACGATCTGCCCTATGTGTTTGAACGGTTTTACCGCGGAGACCGGGCGCGCACGTCGCAATCGGGGGGGAGCGGGCTAGGCCTGTCCATTGCTCAAAGTCTCATCGAAGCGCACCATGGCACCATTCGCGCCGAAGCCGTCGTGCCGCATGGCGTCCGTTTTATCATCACACTCCCCGCCTTAGGCTAA
PROTEIN sequence
Length: 463
VNRLRRRTLVNQLIGRQVALLAILLFVVGVSQYLILRAVLFASTAKTLGNEIAVLTPVVHHTLANRGIAGFQHIADIMVARLRSPGVEVVITNALGQVIAASTNLHAKLPPLYNSPYFIWNQRLVVNRVIGNVYYPSGYVWLLSSTRPIHSILSRDAVLYVFLAVLSLVVAGWLGSLSVRQTLHPLEQIRQMTQRIASGEFGHATRIDNAPAELQDLGESIDRMSESIQALFSQEKALSEQMRRFVADASHELRTPLTAITGFLDLMSHGELTPDEQERGLRAIQAQGRRMGRLVNQLLMLSRMDSAPESHLTLQPIRLDRWLNDLSPEIYNLVDPRPVTMMVAPVTARVDPDRLTQVVTNLLENIRSYTPDDTAVRITVGMAHGSVVMQIEDNGPGIPPDDLPYVFERFYRGDRARTSQSGGSGLGLSIAQSLIEAHHGTIRAEAVVPHGVRFIITLPALG*