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SCNpilot_cont_1000_p_scaffold_300_5

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(3203..3796)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 181.0
  • Bit_score: 236
  • Evalue 6.60e-60
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 181.0
  • Bit_score: 236
  • Evalue 2.90e-59
Pseudouridine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PII6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 181.0
  • Bit_score: 236
  • Evalue 2.10e-59

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 594
ATGTCTCGTTACTTCATCTTTTACAAACCATACCGGGTACTTTGTCAATTTTCGCAGGAAGGCGAAAAAGCAACACTTGCTCATTATTTCCCCGGTCTGCCCAAAAATATTTACCCGGTTGGCAGGCTTGATTATGATAGTGAAGGCTTACTTATTTTGACCGATGACAAGTCGCTTACTGCCCGTTTACTTGATCCAATATTTGCGCATGGCAGAACTTATTTTGTGCAGGTGGAAGGACAAGTGAAAGATGAAGCGATCAAAGAACTAGCAGCAGGTGTTACGATAAATGTTGATGGTAAAAAGTACAAAACAAAAAAAGCGACAGCCAGAATATTGGAGCAGGAACCTGGAGTGCCTGACAGGGATCCGCCAATACGTTTTCGGAAAGATATACCGACATCCTGGATATCGCTTACACTCACTGAAGGTAAGAACAGGCAGGTGCGTAAAATGACAGCAGCGGTAGGTTTCCCAACATTGCGACTGGTGCGTTACAGTATAGGACGTGTAAATATTGCCGGTATGAGGCCGGGTGAATATAAAGAAGCCGGTGAGGAGATAAAGCAGGCTTTGCTGGATAAAGCAAAATAA
PROTEIN sequence
Length: 198
MSRYFIFYKPYRVLCQFSQEGEKATLAHYFPGLPKNIYPVGRLDYDSEGLLILTDDKSLTARLLDPIFAHGRTYFVQVEGQVKDEAIKELAAGVTINVDGKKYKTKKATARILEQEPGVPDRDPPIRFRKDIPTSWISLTLTEGKNRQVRKMTAAVGFPTLRLVRYSIGRVNIAGMRPGEYKEAGEEIKQALLDKAK*