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SCNpilot_cont_1000_p_scaffold_990_5

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: 5437..7224

Top 3 Functional Annotations

Value Algorithm Source
Sensory/regulatory protein RpfC {ECO:0000313|EMBL:EKB47497.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EKB47497.1};; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 599.0
  • Bit_score: 363
  • Evalue 4.80e-97
Sensory/regulatory protein RpfC n=1 Tax=Cecembia lonarensis LW9 RepID=K1L5Y2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 599.0
  • Bit_score: 363
  • Evalue 3.40e-97
GAF sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 572.0
  • Bit_score: 351
  • Evalue 7.20e-94
  • rbh

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Taxonomy

Cecembia lonarensis → Cecembia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1788
ATGAGTGATCCCGCCGCCGGAACCATGGATCATGCCGAGATCCTCCGCGCCGTCTCGCAGGCGCTTTCCACGCTGCTCCAGCCGGGCGATCTCGACGCCTCCATGCAGCGCGCCCTCGAGATCATCGGCCAGGCGGTGAAGGCCGACCGGATGTACATTTTCGAAATCCACTCGTCCCGCTCCTCGGACGATCTCCTGATGAGCCAGAAGCACGAGTGGACCACCCACGGCGTCTCCAGCGAACTCGATAACGCCTCCATGCAGAACCTCTCGTTCGACAAGTTCCTCGGCATGCTTGAGAGCCTGCAGGCGGGCAACGCGTATTCCCGCATCCGCCGCCACTTCACCGAGGCGCAGCACGGCATCCTCGACCCGCAGGGCATCCTCTCCTTTGTCGTCATGCCCATCATCCTGAAGAACGAGCTATGGGGGTTCGTGGGCTTCGACGACTGCAAGACCGAGCGCGAGTGGAGCGACGCCGACCTGGAGAACCTGCGCGCCGCCGCCGCCGGCCTGGGGGGCGCCATCGTGCGCCAGCAGATGGAGCGCTCCTTCCGCCGCCAGACCGAGGAGCTGCGCCGCCACCAGCGCGTGGCCCTGAGCCTCGCCGAGGACGCCCGGCTCGCCGAGCAGGCCGCCGCCAAGGCCAGCGCGGCCAAGAGCACCTTCCTCGCCATGATGAGCCATGAGATCCGCACCCCGCTCAATGGCGTCATCGGCTTTACCGATCTCCTGCTCGCCGAGGGCCTGCCCGACCACCAGGCCGAGCTGGCCGAGTCCATCAAGACCTGCGGCGAAACGCTCCTCAGCCTCATCAGCGACATCCTCGATATTTCCAAGATCGAATCCGGCCGCCTCGACCTCAACTACGAGCCGACCGATGTCGCCCTCTGCACCCGCTCAGTCGTCGCGTCCTTCGAGCCCCTTCTCAACACCCGCCAGATCGAGATCACCTGCAACGTCTCGCCCGATCTCCCAAAATGGCTCCACCTCGACCAGAGCCGGTATTGCCAGATCCTTTTCAACCTTGTCGGCAACGCGGCCAAGTTTACCCGGCAGGGAGGCGTTTCCGTGAACATCTGGACCGAGCGCCATCTCGACCGCATGTATCTCTGCGGCAAGGTGGCGGATTCCGGCGTGGGCATGTCGCCCGAGGACCTGGCCAATATCTTCGAGCCTTTCCAGCAGGGAGAGGGAGCGCGCAAGCACGCCATTGGCGGCTCCGGCCTCGGCCTCGCCATCTGCCGGCGTCTCGTCGAGTCCATGGGCGGCCAGATTTCCGCCCAGAGCGAGCTCGGCGCGGGATCGACCTTCTCCTTTTCCATCGCGACCCGCACCGCTCTCGCCCCGGCGGCGAAGCCTCCTCAGGAGCCTTCTTTTGGCCGCGACTGCAACCAGATGCGCATCCTGGTGGTCGATGACGTGCCCGTGAATCTCAAGCTCTCGTGCCGTTTGCTGGAGAGACTCGGTTTCCGCGCCGACACCGCCTCCAACGGGATGGAGGCCCTGTCGATGCTCGCCGCCTCGCACTACGACATCGTCTTCATGGACATCCTCATGCCAGAGATGGACGGCTACGAGACCGCGCACCGCATCCGCCAGCAGCAGGCGGAGAGCAGCCGACAGCCCTGGATTGTCGCGCTCACCGCCCACGCGCTGGTCGAGAACCGTCACGCCTGCATCGAAGCCGGGATGGACGACTTTCTTACCAAGCCGCTACGGCTTTCCGACATGCAGGCGGCGATCGATCGCTGGCGCACCGGCTCGCGCGGGCTGGAAACACCTTAG
PROTEIN sequence
Length: 596
MSDPAAGTMDHAEILRAVSQALSTLLQPGDLDASMQRALEIIGQAVKADRMYIFEIHSSRSSDDLLMSQKHEWTTHGVSSELDNASMQNLSFDKFLGMLESLQAGNAYSRIRRHFTEAQHGILDPQGILSFVVMPIILKNELWGFVGFDDCKTEREWSDADLENLRAAAAGLGGAIVRQQMERSFRRQTEELRRHQRVALSLAEDARLAEQAAAKASAAKSTFLAMMSHEIRTPLNGVIGFTDLLLAEGLPDHQAELAESIKTCGETLLSLISDILDISKIESGRLDLNYEPTDVALCTRSVVASFEPLLNTRQIEITCNVSPDLPKWLHLDQSRYCQILFNLVGNAAKFTRQGGVSVNIWTERHLDRMYLCGKVADSGVGMSPEDLANIFEPFQQGEGARKHAIGGSGLGLAICRRLVESMGGQISAQSELGAGSTFSFSIATRTALAPAAKPPQEPSFGRDCNQMRILVVDDVPVNLKLSCRLLERLGFRADTASNGMEALSMLAASHYDIVFMDILMPEMDGYETAHRIRQQQAESSRQPWIVALTAHALVENRHACIEAGMDDFLTKPLRLSDMQAAIDRWRTGSRGLETP*