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SCNpilot_cont_1000_p_scaffold_883_7

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: 6343..7860

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KKR03798.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.5
  • Coverage: 502.0
  • Bit_score: 324
  • Evalue 3.60e-85
Polysaccharide biosynthesis protein id=2253549 bin=GWB2_Proteobacteria_55_19 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 492.0
  • Bit_score: 256
  • Evalue 5.00e-65
wzx; LPS biosynthesis flippase similarity KEGG
DB: KEGG
  • Identity: 27.2
  • Coverage: 493.0
  • Bit_score: 228
  • Evalue 6.00e-57

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Taxonomy

GWC2_OD1_39_14 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGCGAACTCGTTCCAAAACCGCAGCATGGAATGTCGTGTTCCACATGCTCTCGATGGGGGTCAGTTCCGTTGCCGCCCTGGTGACGGTGCCGATCAACGTACACTACATCCCGGTCGACCTGTACGGAGCCTGGATTGCGAGTGGCAACATTCTCGCCTGGGCCACGGTGATCGACCCCGGGCTATCCACCGTGATCCAGCAGCAGGCGGCCGCTGCCTATGGCGGTGGTGACCTGAAGCTCCTGGGCCGAATCACCGGCGGCGGTGTTGCGATGAACACCCTCGTCGCGACCATCCTGGTATTCGTCGCGTCCTTTCTCGTTCTCTTCCTGCCCTCCATCCTCGGCATCCCGGCGGACAAGCTCCCGTATGGCGAGCTCCAGATGGCCTGTTGGGTTTCGTGTATTGGCTTTTTCTTCAACGTGGCCGCCTATGCCATTACTGCCGTATGCCTCGGCATCCAGTCCAGTGTCGCGGTGGGCACCATCTTCCTTGTCGGTCTCATCGGCAGCTTTATTTTGCAAATCTACCTGGTCATGCATGGCTGGGGGCCGATGGGCATCGCTCTGGCCACGGTATTTCGCGGTGTCGTGGTACTCGTGGGCGATGGGATCTATCTCGGCTACCGGTTCCTCCAGGAAAAAATCCCCGTGCTCTGGGACAGCGCGGTCACGCGGAAGCTGCTGAGCCTGGTCTCTTTCACCTTTGCCAGCAAGACGGTCGCGACCTTTGCCTCCAATCTCGACTCCCTCCTGATCGTGCGATTGATCTCGCCGGAGGCCGCCGTGGCGATGCGCAGCACCCGGTCGACAGTGGATATCTGCAGCAGCCTCGTTAGCCGTCCGGCTGCCGGGGTGGCGCCCGTGGTGTCTCATCTGGCCGGAGCGGGCGAGCTCGAGAGCAAGCGGCATCAGCTCGTGCGCCTCATCAAGTACTCGATCTGGATCTGCCTTCTGGCCGTGACCGGGCTCATTGCGCTGAACAAGACCTTCGTCACGCTCTGGGTTGGCGCTGCGCTCTACGCGGGCAACCCGACCACGCTGGTTCTTTGCCTGTCGCTGTTTGTCGTGGCGCTGGCGGGTCTGTTCTCGAATCTCACGACGGCGATCGGCGAGATTCGCAGCACGAGCGTCGTCACCGCCATCCAGGCCGCAGTCTCCATCACCTGCCTGTATGTCGGAGGAAAATTCTTCGGCCTCCCGGGCATCGCCGCCGCCACCGGCGTGGGATCAGTCGTTACGGTCATTTATTGCGCCAAGCTCCTGTGGAAACACCGCGTGCTGACCGCAGACACTGTTCGCGAACTCGTCGCCGAGACTCTCCGCTGCGTTTTGGCGCTTGCGGTGACCACCGCAGTGTCCATCCTTTTTGTCCATACCACGGTTTCCTGGGTCGGATTTGTTCTCGCGGCCGGGGCGGTGGTGGTCGTGTTTTTTGCCGTGTTATACATGATCTCGCCGAGCCTACGTTCGGAGTCGGCCAAATTCGCCAACCTCAAGCGATTCCTGAAACGCTGA
PROTEIN sequence
Length: 506
MRTRSKTAAWNVVFHMLSMGVSSVAALVTVPINVHYIPVDLYGAWIASGNILAWATVIDPGLSTVIQQQAAAAYGGGDLKLLGRITGGGVAMNTLVATILVFVASFLVLFLPSILGIPADKLPYGELQMACWVSCIGFFFNVAAYAITAVCLGIQSSVAVGTIFLVGLIGSFILQIYLVMHGWGPMGIALATVFRGVVVLVGDGIYLGYRFLQEKIPVLWDSAVTRKLLSLVSFTFASKTVATFASNLDSLLIVRLISPEAAVAMRSTRSTVDICSSLVSRPAAGVAPVVSHLAGAGELESKRHQLVRLIKYSIWICLLAVTGLIALNKTFVTLWVGAALYAGNPTTLVLCLSLFVVALAGLFSNLTTAIGEIRSTSVVTAIQAAVSITCLYVGGKFFGLPGIAAATGVGSVVTVIYCAKLLWKHRVLTADTVRELVAETLRCVLALAVTTAVSILFVHTTVSWVGFVLAAGAVVVVFFAVLYMISPSLRSESAKFANLKRFLKR*