ggKbase home page

SCNpilot_cont_1000_p_scaffold_1146_23

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: 26934..27644

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal RND efflux outer membrane protein, CzcC family n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DZZ5_METI4 similarity UNIREF
DB: UNIREF100
  • Identity: 29.1
  • Coverage: 189.0
  • Bit_score: 87
  • Evalue 2.40e-14
tolC; Heavy metal RND efflux outer membrane protein, CzcC family similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 189.0
  • Bit_score: 87
  • Evalue 7.70e-15
Heavy metal RND efflux outer membrane protein, CzcC family {ECO:0000313|EMBL:ACD82656.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.1
  • Coverage: 189.0
  • Bit_score: 87
  • Evalue 3.40e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylacidiphilum infernorum → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 711
ATGAAAAACTTCCTACCGTATTTCTGCATGGGGCTTATGGCGGTCAGTGCCTTGGCTCAGACTTCCGACGAGTTGGTCGCGGAGGCCATGAAGAACAATCCCGAACTTCGGTTTTACACTGCCCAGATTGAGGCCCTCCCAAAAACGGCCCAGTTGGCATCACCGAGAATTCCCATCCCACTGGATTTTCCTTCCCGTGAAAAATTCCGGGCCGCAGTTCTTAATCTCGATAAGGAACTTGCTGAGCTTTATCTCGCGGAATTCCGTTTCGCCCTGGCTGGAACTGTTCGTCTGAAAGCGATGGAGTATCAGGCCGCAACCGAAACCGCGAGTAGTGCCAATGACCTCGCTGGCCGCACGGCAGCACTGGTCAAGATGTTGGAGGAACGACCTGCCGCCGGAGTCGCCGCTGTCATCGAGCGGCGAATTCTCGAAGGCGCTTCCCTTCCTTTTATTCGAACCGCAGCCGAGGAGAAGGTGGCGAAAGACCTGCTTCGCACCGAACTCAATGGACTTCTGGGCCGGAAGCCAAATGACGAATTATCCGTCAATGGGAGCTTAGTATCTCCTCCCCAATCGCCCAAACCCGGCACCGAAGCCCTTGTGCTCAAAATCCGCGAGGCAGAAATTGCTCGTGGTTTGGCAGGCTTGGACGCCGCTCTTGATATCGAGGGATTCCAAGTTGGCCCGTGGTTTACCAAGGAAGGACTC
PROTEIN sequence
Length: 237
MKNFLPYFCMGLMAVSALAQTSDELVAEAMKNNPELRFYTAQIEALPKTAQLASPRIPIPLDFPSREKFRAAVLNLDKELAELYLAEFRFALAGTVRLKAMEYQAATETASSANDLAGRTAALVKMLEERPAAGVAAVIERRILEGASLPFIRTAAEEKVAKDLLRTELNGLLGRKPNDELSVNGSLVSPPQSPKPGTEALVLKIREAEIARGLAGLDAALDIEGFQVGPWFTKEGL