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SCNpilot_cont_1000_p_scaffold_1094_18

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: 15248..15841

Top 3 Functional Annotations

Value Algorithm Source
General secretion pathway protein H n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D810_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 206.0
  • Bit_score: 124
  • Evalue 1.20e-25
General secretion pathway protein H {ECO:0000313|EMBL:EDY17364.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 206.0
  • Bit_score: 124
  • Evalue 1.60e-25
Tfp pilus assembly protein FimT-like protein; K08084 type IV fimbrial biogenesis protein FimT similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 114.0
  • Bit_score: 61
  • Evalue 3.80e-07

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 594
ATGGTCGCCATGAGGATGCGTGCTTTCAGCCTGGTGGAGCTTCTCGTCGTGGTGGCGATCATCGGTCTCCTCGCGGTATTGGCAATTCCTGCCATGAACAATATCACGGGCGGCACGTCGATGACGCGGGCGGGACAGATCGTGGCCGACCAGTTTGCCTACGCGAGGCAGGAGGCCGTGGGCAAGAACCGCGAGGTGCAGGTGCGCTTTGTCTGGCGCGACGGCGGCCAGCCCGGTTATGCCGGGGTGCAGTTGTGGGCGCCCGCCCCGAACGACGTGACGAGCTATCGCCCGATCTCGCGCATTTCGTGGCTGCCGGATGGCACGGTGATGGCCTCCAACTCCAAGATGTCGCCCCTGATCGCGGGCGCGTCGATCCGCGAGACCAATGGAGTGTTTCCCGGGAGAGGAAATACGAAGTATTGCGGTTTTCGTTTTCGTCCAGGCGGCGGGACCGACCTCGGGTTTGACACGACTTCGAACTTTGTGACCGTTGTGCGGGACCGCGATGCGTCGAAGACTGATGTGCCGGACAACTACGCCGTGATCCAGGTCGATCAGGTAAATGGTCGCGTACGCACCTATAGACCGTGA
PROTEIN sequence
Length: 198
MVAMRMRAFSLVELLVVVAIIGLLAVLAIPAMNNITGGTSMTRAGQIVADQFAYARQEAVGKNREVQVRFVWRDGGQPGYAGVQLWAPAPNDVTSYRPISRISWLPDGTVMASNSKMSPLIAGASIRETNGVFPGRGNTKYCGFRFRPGGGTDLGFDTTSNFVTVVRDRDASKTDVPDNYAVIQVDQVNGRVRTYRP*