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SCNpilot_cont_1000_p_scaffold_1744_15

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: 13719..14822

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkerma similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 385.0
  • Bit_score: 467
  • Evalue 1.90e-128
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 385.0
  • Bit_score: 455
  • Evalue 1.30e-125
  • rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746326 similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 377.0
  • Bit_score: 485
  • Evalue 6.20e-134
  • rbh

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Taxonomy

Akkermansia sp. CAG:344 → Akkermansia → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1104
ATGAAGAGAAAGCGCGTCGTCGTTCTCGGGGCCACGGGCTCCATCGGCCAGAGCGCCCGCAAGGTGGCGCGGGACATCCCGGATCGCATGGAGATCGTCGGCCTTTCGGCGCATTCCAATGCGGAGGGCCTGCGCGAAGCCCTGGCGGAATTTCCCGATGCGAAAGCCGTGCTTTCCTCCGACCCGAACGGCGAAGAACGTCTCATTGAACTGGCGCAAATGCCCGAGGCCGACATGGTCCTCATCGCCATCGTGGGAACGGGCGGTCTCCGCCCGGCGCTCGCCGCCATCGAGGCGGGCAAGGACATCGCCGTGGCGAGCAAGGAAATCCTCGTCCTCGCGGGCGAGGCCGTGATGACTGCCGCCGCCCGCAAGGGCGTCAACGTCCTGCCGGTCGACAGCGAACACAACGCCATCTTTCAATGTCTCGACGGCCGCCCGGCGGATTCCGTGCGCCGCCTCATCCTGACGTGCTCCGGCGGACCTTTCCGCCAGACGCCCGCCGGGGAACTGGAGTCCGTCACGCCGGAGCGGGCGCTCAAGCACCCGACCTGGTCGATGGGCCGCAAGATCAGCATCGACTCGGCTACGCTCTTCAACAAAGGGCTCGAAATGATCGAGGCCCGCTGGCTCTTCGGGGTGCCGATGGACAAGGTCGACGTGATCGTCCACCCGCAGAGCATAGTCCACTCGATGGTGGAGTTTACCGACAGCTCGGTGCTGGCCCAGCTCAGCCACTCCGACATGTGTTTCCCGATCCAGTACGCCGTGACATGGCCCGACCGGGTGGCGAATTCCCTGCGCCCGCTGGATTTTGCCCAGCTCGCGAAGCTCGACTTCGAGGCGCCACGCCGCGAGGTCTTTCCGGCGCTTGATCTCGCGCATCGCGCCGGTTCCGAGGGTGGCACACTGCCCGCCGTGCTCAATGCCGCCAATGAAGTCGCCGTCGACGCCTTTCTGAATCGACGCCTCGCCTTCCCCGCCATCTGGCGCACCGTGGAGCGCGCGATGAACGAAGTGCCTTTCGTCGCGCATCCGTCGCTGGACGAACTTCTCGAAGCCGACCGACTCGCCCGGACCGCCGCAGCCGCAGCGATCGGGTAA
PROTEIN sequence
Length: 368
MKRKRVVVLGATGSIGQSARKVARDIPDRMEIVGLSAHSNAEGLREALAEFPDAKAVLSSDPNGEERLIELAQMPEADMVLIAIVGTGGLRPALAAIEAGKDIAVASKEILVLAGEAVMTAAARKGVNVLPVDSEHNAIFQCLDGRPADSVRRLILTCSGGPFRQTPAGELESVTPERALKHPTWSMGRKISIDSATLFNKGLEMIEARWLFGVPMDKVDVIVHPQSIVHSMVEFTDSSVLAQLSHSDMCFPIQYAVTWPDRVANSLRPLDFAQLAKLDFEAPRREVFPALDLAHRAGSEGGTLPAVLNAANEVAVDAFLNRRLAFPAIWRTVERAMNEVPFVAHPSLDELLEADRLARTAAAAAIG*