ggKbase home page

SCNpilot_cont_1000_p_scaffold_1744_18

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: 16797..18563

Top 3 Functional Annotations

Value Algorithm Source
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 582.0
  • Bit_score: 753
  • Evalue 6.20e-215
  • rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745ED2 similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 594.0
  • Bit_score: 848
  • Evalue 3.40e-243
  • rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 607.0
  • Bit_score: 794
  • Evalue 8.30e-227

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1767
ATGAAGTACTGTCCGAGTGTCTACGGGTCGCCGCGTCGCCTGACGCGCGTGGTTGATGTGGGCGGGGTGCACCTGGGCGGATCGAATCCGGTCCGCCTCCAGTCCATGCTCACCTGCGATACCATGGATACCGAGGCCTGCATCCAGCAGACGCTTGAGCTGGTCGAGGTAGGATGCGAGATCGTCCGCATCACGGCCCCCACCGTAAAAGACGCCGCCAACCTCGAGCACGTCTCGAAGGGCCTGCGAGCCAGGGGATGCCATGTCCCGCTCGTCGCTGACATTCATTTCAAACCCGAGGCGGCGATGGAAGCCGCCAAGTGGGTCGAGAAAGTCCGCATCAATCCCGGCAACTACGCCGACTCGAAGAAATTCAAGATCATCGAGTACACGGATGACCAGTACCTCCAGGAACTCGACCGCATCCGCGAGCGCTTCACCCCGCTCGTCCAGTTTTGCAAGGAGCATGGCCGCGCCATGCGCATCGGCACGAACCACGGCAGCCTGAGCGACCGCATCATGAACCGCTACGGCGACACGCCGCTCGGCATGGTGGAGAGCGCGCTGGAGTTTGCCCGCATCGCCCGCGAGCTGGATTACCACCAGTTCGTCTTCTCGATGAAGGCGAGCAATCCGAAGGTGATGATCGCCGCCTACCGCCTGCTCGTGGCCCGACTCAACGAGCTCGGCGACGATTGGAATTATCCCGTGCACCTCGGCGTGACCGAGGCGGGAGACGGAGAGGATGGCCGCATCAAGAGCGCCATCGGCATCGGCAGCCTGCTCGGTGACGGCATTGGCGACACGGTGCGTGTCTCGCTCACGGAGGACAGCATTCACGAGATCCCCGTGGCCCGCGCCTTGGTGGAATTGATCAAGCCCGTCGGCGCTCCCGTGGCCGAGGCCGAGCCGTCCTACGACCCCTTTTCCTACGCCCGCCGCCCCACCGCGACGCTCCAGATCGGAGAGGCCAGGCTCGGAGGCGAGGAGCTGGTCCGCGTGGCCGTGCGCCAGCAGACCTACGACCAGGTCGCCCACAAGGTCGACCGGATGGGTGATTACCAGCCGGAGTTCGTCGTCGAATCCTCCGGCGCCATCGCCATCGACCCGCGTTCGGATGAGGAAATACAAACGCTGTCCGTATTGGCCGATCCCGCATTGATCACGGTGCGCGACGGACTGGACCTGCCCGTGGTGCCAGCCTACAGGCTGCTCGCCGCCCGGGTGCCGGGTCGCCATCCCATCCTGCTCAAGGACACGCTCACTCCCGCCACGGAGGCCGGCGACTTTCTCCCGAACCTCCTCGGAGCCGCCGCCCATATCGGCGCGCTGCTTTGCGATGGGATCGGTGACGCCGTGCTGGTCCAGGGCGAATCCGCCCCCGGCCAGTCGCTGCGCCTCGCCTACAACATCCTCCAGGCGGCAGGGACCCGCATCTTCAAGACCGATTACGTGGCCTGCCCGAGCTGCGGACGCACCCTTTTCAACCTCCAGTCGACCACGGCCCGCATCAAGGCCGCCACCAGCCACTTGAAGGGCGTGAAAATCGCCATCATGGGCTGCATCGTCAACGGACCGGGCGAAATGGCGGACGCCGACTTCGGCTACGTGGGCGGTGCCCCTGGTAAGATCAACCTCTACGTCGGAAAAACCGCGGTGAAGTTCAATATCCCGGAGGCCGAAGCCGTGGATCGGCTCAAAGATCTCATCCGCGAGCATGGCCGCTGGGTCGATGCTCCCGCGCCTGCGGAGCCCGTTCATTCGTAA
PROTEIN sequence
Length: 589
MKYCPSVYGSPRRLTRVVDVGGVHLGGSNPVRLQSMLTCDTMDTEACIQQTLELVEVGCEIVRITAPTVKDAANLEHVSKGLRARGCHVPLVADIHFKPEAAMEAAKWVEKVRINPGNYADSKKFKIIEYTDDQYLQELDRIRERFTPLVQFCKEHGRAMRIGTNHGSLSDRIMNRYGDTPLGMVESALEFARIARELDYHQFVFSMKASNPKVMIAAYRLLVARLNELGDDWNYPVHLGVTEAGDGEDGRIKSAIGIGSLLGDGIGDTVRVSLTEDSIHEIPVARALVELIKPVGAPVAEAEPSYDPFSYARRPTATLQIGEARLGGEELVRVAVRQQTYDQVAHKVDRMGDYQPEFVVESSGAIAIDPRSDEEIQTLSVLADPALITVRDGLDLPVVPAYRLLAARVPGRHPILLKDTLTPATEAGDFLPNLLGAAAHIGALLCDGIGDAVLVQGESAPGQSLRLAYNILQAAGTRIFKTDYVACPSCGRTLFNLQSTTARIKAATSHLKGVKIAIMGCIVNGPGEMADADFGYVGGAPGKINLYVGKTAVKFNIPEAEAVDRLKDLIREHGRWVDAPAPAEPVHS*