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SCNpilot_cont_1000_p_scaffold_2549_8

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: comp(7977..9386)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 469.0
  • Bit_score: 748
  • Evalue 7.10e-213
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 469.0
  • Bit_score: 744
  • Evalue 1.80e-212
  • rbh
3-isopropylmalate dehydratase large subunit n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PT24_MEIRD similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 469.0
  • Bit_score: 744
  • Evalue 5.60e-212
  • rbh

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Taxonomy

Meiothermus ruber → Meiothermus → Thermales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 1410
ATGAGCAAAACATTATTGGATAAAGTCTGGGAGGCGCACACCGTGCGCAAACTGCCGAACGGAGCAACTCAACTGTTGATCGGCACCCACCTTATTCATGAGGTGACCAGCCCTCAGGCTTTCGGCATGCTGCGCGATCTGGGCCTCAAGGTCCTCTATCCGCAGCGCACCTTCGCCACCGTCGACCACATCGTGCCCACCGACGAGCGCGAGGAGCCGTTTTCTGATCCGCTGGCGGACGAAATGATCAAGGCCCTCCGTGCCAACTGCGACGAGTTCAACATCAAGTTCTTCGACCTGCCCACCGGCGCGCAGGGTATCGTGCACATCGTCGGTCCCGAGCAGGGCATCACCCAGCCCGGCACCACCATCGCCTGCGGCGACTCGCACACCTCGACCCATGGCGCTTTCGGCGCGATCGCCTTCGGCATCGGCACCAGCCAGGTCCGCGACGTGCTCGCCACCCAGACCATGGCCCTGCACAAGCCCAAGGTCCGCCGCGTCAATGTCGACGGCAAGCTCGCCCCCGGCGTCTATGCCAAGGACGTCATCCTCCACATCATCCGCAAGCTCGGGGTGAATGGCGGCATCGGCTATGCCTACGAATACGGCGGCTCGACCTTTGACAATTTCACCCAGGAAGAGCGCATGACCGTCTGCAACATGTCCATCGAGGGCGGCGCCCGCGTGGGATATGTGAACCCGGACGACACCACCTTCGATTACCTCAAGGGCCGTCCCTACGCGCCCAAGGCCGAGGAGTGGGATGCCGCGGTCGCCCGCTGGCGCTCCTTCGCCTCCGACCCGGACGCCACCTACGACGACGTGGTGAACTTCCGCGCCGAGGATATCGGACCCACGATCACCTGGGGCATCAACCCCGGCCAGGCTATCTTCATCGACGAAAACGTCCCGACTCCCGCCGAACTCCCCGAGAAGGATCGCGCGACCGCCGAGGAGGCGCTCGTGCATATGAATCTCGCGCCCGGCAAGCCCATCAAGGGCACCAAGGTCGACGTCGCCTTCCTTGGCAGCTGTACCAACGGCCGCCTGAGCGACCTCACCGAGGTGGCGCGCTTCGTCAAGGGACGCAAGGTGAAGGATGGCGTGAAGGCCATCGTCGTTCCCGGCTCCCAAGGCGTCTCACAGATCGCCGAGAAAATGGGCCTCGCGGAGATCTTCCGCGACGCCGGTTTCGAATGGCGCGGCGCAGGCTGCTCGATGTGCCTCGGCATGAACCCCGACAAACTCGTCGGCCATCAGCTCTGCGCCAGCTCCAGCAACCGCAACTTCAAGGGCCGCCAGGGCAGCCCGACCGGCCGGACCGTGCTTATGAGCCCGATCATGGTCGCCGCCGCCGCCCTCACCGGCGAGATCACCGACGCCCGCGAAGTCTTCGACATCAAATAA
PROTEIN sequence
Length: 470
MSKTLLDKVWEAHTVRKLPNGATQLLIGTHLIHEVTSPQAFGMLRDLGLKVLYPQRTFATVDHIVPTDEREEPFSDPLADEMIKALRANCDEFNIKFFDLPTGAQGIVHIVGPEQGITQPGTTIACGDSHTSTHGAFGAIAFGIGTSQVRDVLATQTMALHKPKVRRVNVDGKLAPGVYAKDVILHIIRKLGVNGGIGYAYEYGGSTFDNFTQEERMTVCNMSIEGGARVGYVNPDDTTFDYLKGRPYAPKAEEWDAAVARWRSFASDPDATYDDVVNFRAEDIGPTITWGINPGQAIFIDENVPTPAELPEKDRATAEEALVHMNLAPGKPIKGTKVDVAFLGSCTNGRLSDLTEVARFVKGRKVKDGVKAIVVPGSQGVSQIAEKMGLAEIFRDAGFEWRGAGCSMCLGMNPDKLVGHQLCASSSNRNFKGRQGSPTGRTVLMSPIMVAAAALTGEITDAREVFDIK*