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SCNpilot_cont_1000_p_scaffold_2799_2

Organism: SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 5 ASCG 14 / 38
Location: 464..1012

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 181.0
  • Bit_score: 195
  • Evalue 5.30e-47
def; N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 177.0
  • Bit_score: 171
  • Evalue 2.40e-40
hypothetical protein n=1 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00036C80E9 similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 173.0
  • Bit_score: 199
  • Evalue 2.60e-48

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 549
ATGATCCTTGAGATAGTCGAATACGGGCATCCCGCCCTGCGTGCCAAAGGCCGTAAAATCGAAAAGATCGATCACGACCTCCTGCAGCTGATTTCCGACATGCTTGAGACCATGTATGAGGCCGATGGCGTCGGGCTCGCCGCCCAACAGGTGGGACGCCCCATTCAGCTTTGCATCATCGACGTCGACGGTGTGACCGACCGCCCGAGTACGATGTGGATCGATGGCAAGAAGGTGGATCTCTCCGAGGAGATGCCCATGGTCCTCATCAACCCGGAACTCGAGCTCATCGGCAAACCCAAGGCTGGAGTCGAGGGCTGCCTGAGTTTCCCGGGCTTGCGCGCCGATGTTGAGCGCCCGCCGCGGGTCAAGGTCCGGGCCATTGACGCGGAGGGCCAGCCTCTGGTCTTCGAAGCCGATGGATTGCTGGCCCGAGCGGTCCAGCATGAGTACGACCATCTCCAGGGTGTCCTCTTCATCGATCGCCTCTCCGCGAAAGAAGAGCAGAAGCTCGATGCCGAGTATCGGAAATACATCGTCAGGCCTTGA
PROTEIN sequence
Length: 183
MILEIVEYGHPALRAKGRKIEKIDHDLLQLISDMLETMYEADGVGLAAQQVGRPIQLCIIDVDGVTDRPSTMWIDGKKVDLSEEMPMVLINPELELIGKPKAGVEGCLSFPGLRADVERPPRVKVRAIDAEGQPLVFEADGLLARAVQHEYDHLQGVLFIDRLSAKEEQKLDAEYRKYIVRP*