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SCNpilot_cont_1000_p_scaffold_1280_7

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(7286..7927)

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 194.0
  • Bit_score: 247
  • Evalue 1.40e-62
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 194.0
  • Bit_score: 240
  • Evalue 6.40e-61
Peptidyl-tRNA hydrolase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3J7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 194.0
  • Bit_score: 247
  • Evalue 9.80e-63

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGAGCGACGAGCGACAAAGCCGGGGGACAAAAGACCCAGCCGGTACGCCTCTGCTTCTGGTCGGCTTGGGCAACCCCGGATCGCAATATGCGAAGAACCGGCACAATGCCGGGTTCATCGTGGTGGACGAGATCCATGCCGCGCACGGCTTTGGGCCCTGGAAGACCAAATTCGACGGCCTGATTTCCGAAGGCAGGCTTGCCGGCCGCAAGACATACCTGCTCAAGCCCCAAACCTATATGAACCTGTCCGGCGACAGCGTGGGACCGGCGCTGCGCTTCTTCAAGCTGCCGCTGTCGGCGCTGGTCGTCATCCATGACGAGATCGACCTGGCGGCCGGCAAGCTGAAGGTGAAGACGGGTGGAGGCGATGCGGGGCAGAACGGCCTGAAATCCATCACCGCCACCATCGGGCCTGATTACCGCCGGGTGCGGGTGGGCATCGGCCATCCCGGCCAGAAGGAGATGGTCAGCGGCCATGTGCTGGCCAATTTCAGCAAGGACGAAATCGTCTGGCTGAAGCCCATGGTGGAGGCGATGGTCCAGGCCGCGCCGCTGCTGGCGAAGGACGACGACAACGGATTCATGAGCAAGGTGGCGCTGCTGACGCAGCCGCCGAAACCAAAGAAAGACGTAGAATAA
PROTEIN sequence
Length: 214
MSDERQSRGTKDPAGTPLLLVGLGNPGSQYAKNRHNAGFIVVDEIHAAHGFGPWKTKFDGLISEGRLAGRKTYLLKPQTYMNLSGDSVGPALRFFKLPLSALVVIHDEIDLAAGKLKVKTGGGDAGQNGLKSITATIGPDYRRVRVGIGHPGQKEMVSGHVLANFSKDEIVWLKPMVEAMVQAAPLLAKDDDNGFMSKVALLTQPPKPKKDVE*