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SCNpilot_cont_1000_p_scaffold_1280_18

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(16630..17406)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVF0_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 222.0
  • Bit_score: 268
  • Evalue 6.50e-69
two component transcriptional regulator; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 222.0
  • Bit_score: 268
  • Evalue 2.00e-69
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS63883.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 222.0
  • Bit_score: 268
  • Evalue 9.10e-69

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGTGGCATGCATTGCAGCATGGCTTATGCGAAAATCGCAAGGGTCGGACCGGCAATTTCGCTTGCCTGGCCGGCATGGCAGCCATGAGCGCGGGCAGCGAGCCCCATCTGCTGGTGGTCGATGACGATGAGAGGCTGCGGGCCCTGCTGCAGCGTTATCTTTCGGGCAATGGCTACCGGGTCAGCGCCGCCACGGGCGCCGCCGAGGCGCGGGCGCTGATGAAAAGCATGGAATTCGACCTCTTGATCCTGGACGTGATGATGCCGGGGGAAACGGGACTGGACCTGACCCGCAGCGTGCGGGAAACCTCCTCGGTTCCCATCCTGATGCTGACCGCCAGGGGCGATCCGGCCGACCGTATCGCGGGGCTGGAACAGGGGGCGGACGACTATCTGCCCAAGCCCTTCGAGCCGCGCGAGCTTTTGCTCAGGGTGAACTCGCTTTTGCGCCGGGCTACCCCGCCCGAAGCGCCGGCCCCCGGGCCGGTGCGGATGGGACCGGCACAATTCGATCCGGCCACGGCGCGGCTGACCCGCGCCGGCAAGCCGGTGAAGCTGACAGGTGCCGAGGCCGCGCTGCTGCAGCTTTTCGCCACCAATGCGGGCCGGCCCTTCTCGCGTGCCGATTTGTGCAGGCAGCTGAATGTTGCCCTTGAACGGTCCATCGACGTGCAGGTGACACGGCTTCGCCGCAAGATCGAGGAAGACCCCAAGCTGCCGCTCTATCTCCAGACAGTGCGGGGCGTGGGTTATATGCTGGTGCCGGATCGTGGGTGA
PROTEIN sequence
Length: 259
MWHALQHGLCENRKGRTGNFACLAGMAAMSAGSEPHLLVVDDDERLRALLQRYLSGNGYRVSAATGAAEARALMKSMEFDLLILDVMMPGETGLDLTRSVRETSSVPILMLTARGDPADRIAGLEQGADDYLPKPFEPRELLLRVNSLLRRATPPEAPAPGPVRMGPAQFDPATARLTRAGKPVKLTGAEAALLQLFATNAGRPFSRADLCRQLNVALERSIDVQVTRLRRKIEEDPKLPLYLQTVRGVGYMLVPDRG*