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SCNpilot_cont_1000_p_scaffold_1315_5

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(3164..3796)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQB5_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 197.0
  • Bit_score: 110
  • Evalue 2.40e-21
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 197.0
  • Bit_score: 110
  • Evalue 7.50e-22
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABS62098.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 197.0
  • Bit_score: 110
  • Evalue 3.40e-21

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGTCGGAAGCGGCCTCGCGTCCTGCCAAAGCAACCCCCAGGCCCCGCCGTGCGCGCGATGCCAGCCGCGCGGCGTCGCGGTCGGCGATCCTGGCGGCGGCGCGCCGGGTGGCGTCGCGCGACGGCGCCCGCGATCTGTCATTGCGCGGCGTGGCGGCCGAGGCCGGTTTCGCTCCCGCCGCGCTTTATGGCTATTTCCGCAACAAGGACGAATTGCTGCTGGCCCTGGCGGCTGACGACCTGACGGTTCTGGCGCGGGCCATGCGCGATGCGGGCCCGGCGGGACTGGCCGGAGCCGGAGCGGCGGCGCTCAATCTGCTCAAGGGCGCGGAGACGATGGCGGCGGCTTCGGCGGCGCTGGCCGGTACGCCGCAGGAGGCCGGCCCGAAGGAGGCCGGCAAGCTTGCCGAGGCGGAGCGGTTGTTCAACGGCCGGCTGATCGCCGCGCTCAAGGCGCTTTCGGACGCAGGCGGCCTTCCCACGGGCAGCCGCGAAAGCCAGTGCGATGTGGTGCTGGTGGCGGCGTCGCTGGCGGGGCTGGCGCTTCTGGCGCGGTCGGGCCGGCTGGGCGCGCTGGGCTTTTCGCCCGAAGAGATGATCGCCCGGCTGGACGGCCGCTTCGGCAGGGGCTGA
PROTEIN sequence
Length: 211
MSEAASRPAKATPRPRRARDASRAASRSAILAAARRVASRDGARDLSLRGVAAEAGFAPAALYGYFRNKDELLLALAADDLTVLARAMRDAGPAGLAGAGAAALNLLKGAETMAAASAALAGTPQEAGPKEAGKLAEAERLFNGRLIAALKALSDAGGLPTGSRESQCDVVLVAASLAGLALLARSGRLGALGFSPEEMIARLDGRFGRG*