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SCNpilot_cont_1000_p_scaffold_1994_15

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(14843..16132)

Top 3 Functional Annotations

Value Algorithm Source
mandelate racemase/muconate lactonizing protein; K12661 L-rhamnonate dehydratase [EC:4.2.1.90] similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 395.0
  • Bit_score: 694
  • Evalue 2.50e-197
  • rbh
L-rhamnonate dehydratase {ECO:0000256|HAMAP-Rule:MF_01288}; Short=RhamD {ECO:0000256|HAMAP-Rule:MF_01288};; EC=4.2.1.90 {ECO:0000256|HAMAP-Rule:MF_01288};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 388.0
  • Bit_score: 694
  • Evalue 1.10e-196
L-rhamnonate dehydratase n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI0003825646 similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 395.0
  • Bit_score: 697
  • Evalue 9.40e-198
  • rbh

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGGGGCCGCCGTCGGGCTGGCTGACATGTGCCGCGCCAGGCTATAGGCTCGCTATCAGTTTGGACAAAAATGGCGCCCGGCGGGCGGATGGGGAGGCAAGGTTGCGATTTCCGGCGATAAGGCAGGTCCGCGCCTTCGTGGTACGGGGCGGCGGCGCGGACTATCACGACCAGGGCGAAGGCCATTGGATCGACGACCACATCGCCACGCCGATGGCGCGCTATGCCGAGTACCGACAGTCGCGCCAGAGCTTTGGCATCAATGTGCTGGGCACGCTGGTGGTCGAGATCGAGGCCGCCGACGGCACCATTGGCTTTGCCGTGACCACGGGCGGCGAGCCGGCCTGCTATATTGTGGAAAGGCACCTTTCGCGCTTCCTGGAAGGGCGTGATCCGATGGAAGTGGAGAAAATCTGGGACCAGATGTATTTCTCCACCCTGTTTTATGGGCGCAAGGGACTTGTGGTCAACGCCATCTCGGGTGTGGACCTGGCGCTCTGGGATCTTCTGGGCAAACTGCGCGGCGAGCCGGTGCATCAGCTTCTGGGCGGCGCCGTGCGCGAAGAACTGCAATTCTATGCCACCGGGGCGCGGCCCGACCTGGCCAAGGACATGGGCTTCATTGGCGGCAAGATGCCGCTGCATTACGGCCCCGGTGAAGGCGAAGAAGGCCTGAAAAAGGCGCTGACCGAGATCGCCGATATGCGCGGCCGCGTCGGTCCCGATTTCTGGCTGATGTTGGATTGCTGGATGTCGCTGGACCTGAACCATGCCACAAGGCTGGCGCGCAATGCCTGGGAAGAGTCGGGGCTGAAATGGATCGAGGAAGCCCTGTCGCCCGACGACTATTGGGGTTATCGCGAATTGAAACGCAACGTGCCACCCGGCATGCTGGTGACCACCGGCGAGCATGAAGCCACGCGCTGGGGCTTTCGCATGCTGCTGGAGATGGATTGCTGCGACATCATCCAGCCCGATGTAGGCTGGTGCGGCGGCGTAACCGAGTTGATCAAGATCGCCAATCTGGCCGACGCGCACGGCAAACTGATGGTACCGCACGGCTCATCAGTCTATTCCTATCACTTCGTCATCACCCGCCATAACAGTCCCTTTGCCGAATATCTGATGATGGCACCAAAGGCCGACAAGGTGGTGCCCATGTTCGCGCCGCAATTGCTGGGCGAACCGGTGCCGCAGAATGGCCGCATCAAACTGTCGGCGCTGGACAAGCCGGGGTTCGGAGTAGAGATCAATCGCGCGATCGAACTGCATCGGCCCTATCCCCGATGA
PROTEIN sequence
Length: 430
MGPPSGWLTCAAPGYRLAISLDKNGARRADGEARLRFPAIRQVRAFVVRGGGADYHDQGEGHWIDDHIATPMARYAEYRQSRQSFGINVLGTLVVEIEAADGTIGFAVTTGGEPACYIVERHLSRFLEGRDPMEVEKIWDQMYFSTLFYGRKGLVVNAISGVDLALWDLLGKLRGEPVHQLLGGAVREELQFYATGARPDLAKDMGFIGGKMPLHYGPGEGEEGLKKALTEIADMRGRVGPDFWLMLDCWMSLDLNHATRLARNAWEESGLKWIEEALSPDDYWGYRELKRNVPPGMLVTTGEHEATRWGFRMLLEMDCCDIIQPDVGWCGGVTELIKIANLADAHGKLMVPHGSSVYSYHFVITRHNSPFAEYLMMAPKADKVVPMFAPQLLGEPVPQNGRIKLSALDKPGFGVEINRAIELHRPYPR*