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SCNpilot_cont_1000_p_scaffold_237_26

Organism: SCNPILOT_CONT_1000_P_Microbacterium_71_138

near complete RP 47 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 10 / 38
Location: 24428..26398

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 656.0
  • Bit_score: 1242
  • Evalue 0.0
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003137E03 similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 702.0
  • Bit_score: 824
  • Evalue 1.00e-235
  • rbh
rho; transcription termination factor; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 693.0
  • Bit_score: 790
  • Evalue 5.10e-226

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1971
ATGTCCGTAGTCGTCGCGCGCCCCATCCTCTACAAGGGAGTACTCGTGGAGTCCATCTCCGAGATCCAGACCGAAGACAACACCACCCCGGCCGACGCGGCGCTGCCGTTCGAGGGCCCCGACATCGAGGTGCCGAGCGACCAGCCGGCGCCGGCCGATGCCACCCCCGCGGCCGCCGACGCGCCCGCTGCCGAGGCCGACGCACCCGCGCGCAAGACGGCCCGTAAGCCCGCCCGCCGCCGCGTCTCGGCACTCGCCGCCGACCTCGGCGTCGACGCCAAGACCGTCATCGCTCGCGCCGCCGAGCTCGGTGCGAGCCTGAAGAGCGCGCAGTCGGCCGTCGACGACGACCTCGCTGCGCAGCTCACCGCATCCTTCGCCGAGCCCGCTGACGCCGCCGCGGTCGAGCCGGCAGCGATCGACACCGTCGAGGGTGACCTGGCCACCGAGGGGGATGCCGCGGCATCCGCCGCCGACGAGGCGCCGGCCGACGCCGCCGCGGCCGGTGAGACCGAGGGCGCCGAGCAGGCCGACGGCGAGCCCGCCGAGGGCGAGCAGCCCACCGGCAGTCGTCGCAGCCGTAGCCGCAACCGGAACCGCAACCGCAACCGCAACGCCAACGGCGGCGAGCAGGGCCAGGCGCCCGCCGCGAGCGAGTCCTCGGACGACGCGCAGGCCGCCCCAGCGATCGCCGGCGGCGCGCAGACCCCTGCCCAGAGCCGCAACCGTCAGCGCAACAAGCGCCGCGGTCAGGGCCAGACCGGTGACGAGTTCGAGACCGAGATCGGCGAAGACGACGTGCTGCTGCCGATCGCCGGCATCCTCGACGTGCTCGACAACTACGCCTTCGTGCGCACGACCGGCTACCTTCCCGGCCCGAGCGACGTCTACGTCTCGCTCGGTCAGGTCAAGAAGTACAACCTGCGCAAGGGTGACGCGATCGTCGGCGCGATCAAGCAGCCGCGCGAGAACGAGGCACCCAGCCGCCAGAAGTACAACGCCCTCGTCAAGGTGGACTCGGTCAACGGCCTCGCCCCCGACGACGCCGAGAACCGCGTCGAGTTCGGCAAGCTCACCCCGCTCTATCCGCAGGAGCGCCTGCGTCTCGAGACGGCGCCGGAGAAGCTCACGCAGCGCATCATCGACCTGGTCGCCCCCATCGGCAAGGGTCAGCGCGGCCTGATCGTCGCGCCCCCGAAGGCGGGCAAGACGATCGTGCTGCAGCAGATCGCGAACGCGATCGCGACCAACAACCCCGAGGTCCACCTCATGGTCGTGCTCGTCGACGAGCGGCCCGAAGAGGTCACCGACATGCAGCGGACGGTCCGCGGCGAGGTCATCGCCTCGACCTTCGACCGTCCCGCCGAAGACCACACCACCGTCGCCGAGCTCGCCATCGAGCGCGCCAAGCGCCTCGTCGAGCTCGGTCGCGACGTCGTCGTTCTGCTCGACTCGATCACCCGTCTCGGCCGCGCCTACAACGTCTCAGCGCCCACGAGCGGCCGCGTGCTCTCGGGCGGTGTGGACGCCTCGGCGCTGTACCCGCCCAAGCGCTTCTTCGGCGCCGCGCGCAACATCGAGAACGGCGGCTCGCTGACGATCCTCGCGACGGCGCTCGTCGAGACCGGCTCCAAGATGGACGACGTCATCTTCGAGGAGTTCAAGGGCACCGGCAACAGCGAGCTGCGCCTCTCGCGCCAGCTCGCCGACAAGCGCATCTTCCCGGCCGTCGACGTCAACGCGTCGAGCACGCGCCGCGAGGAGATGCTGCTGTCGGCCGACGAGGTCAAGATCACGTGGAAGCTGCGCCGCGCACTCGCCGGCCTCGACGCCCAGCAGGCGCTCGAGGTCGTGCTCGGCAAGCTCAAGGAGACGCAGTCGAACGTCGAGTTCCTCGTGCAGATGCAGAAGTCGATCCCGGCGCCCGCCGGTGGCGGCCACTCGCACGGACACGAGAACAACATCCGCTGA
PROTEIN sequence
Length: 657
MSVVVARPILYKGVLVESISEIQTEDNTTPADAALPFEGPDIEVPSDQPAPADATPAAADAPAAEADAPARKTARKPARRRVSALAADLGVDAKTVIARAAELGASLKSAQSAVDDDLAAQLTASFAEPADAAAVEPAAIDTVEGDLATEGDAAASAADEAPADAAAAGETEGAEQADGEPAEGEQPTGSRRSRSRNRNRNRNRNANGGEQGQAPAASESSDDAQAAPAIAGGAQTPAQSRNRQRNKRRGQGQTGDEFETEIGEDDVLLPIAGILDVLDNYAFVRTTGYLPGPSDVYVSLGQVKKYNLRKGDAIVGAIKQPRENEAPSRQKYNALVKVDSVNGLAPDDAENRVEFGKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIATNNPEVHLMVVLVDERPEEVTDMQRTVRGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNVSAPTSGRVLSGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDDVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSADEVKITWKLRRALAGLDAQQALEVVLGKLKETQSNVEFLVQMQKSIPAPAGGGHSHGHENNIR*