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SCNpilot_cont_1000_p_scaffold_985_24

Organism: SCNPILOT_CONT_1000_P_Microbacterium_71_138

near complete RP 47 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 10 / 38
Location: comp(19520..20197)

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000347DFA2 similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 222.0
  • Bit_score: 385
  • Evalue 3.20e-104
  • rbh
KDP operon transcriptional regulatory protein KdpE {ECO:0000313|EMBL:KJL36018.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 225.0
  • Bit_score: 439
  • Evalue 3.40e-120
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07667 two-component system, OmpR family, KDP operon response regulator KdpE similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 222.0
  • Bit_score: 376
  • Evalue 7.90e-102
  • rbh

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGAAGGTTCTGGTGGCCGATGACGACCCGCAGCTCGTGCGGGCGCTGCGCATCACGCTGTCGGCGCACGGCTACGAGGTGATCGCCGCGCCCGACGGGGCGGCGGCGGTGACGCTCGCCGCGCAGGCGCATCCCGACATCGTGCTGCTCGATCTCGGGATGCCGCGGCTCGACGGCGTGCAGGTGATCGAGGCGCTGCGCGGCTGGACGACCGCGCCGATCATCGTGGTCTCGGGACGCACGGGCTCGGCCGACAAGGTGGAGGCGCTCGACGCCGGCGCCGACGACTACGTCACGAAGCCGTTCCAGGTCGACGAGCTGCTGGCGCGGCTGCGCGCATTGGCGCGTCGGCGACCGGATGCCGCGGGCGAGCCGGTGGTGCGCTTCGCCGACGTGACGATCGACCTCGCCGCCAAGTCGGTGACGCGGGCGGGCGCGCGCGTGCATCTGACGCCGACCGAGTGGCGGATGCTGGAGTTCCTCGCCCGCAACCCCGACGCGCTGGTCACCCGGCAGACGCTCTTGAAGGAGATCTGGGCGAGCGAGCAGATCGCCGACACCGGGTATCTGCGCCTCTACATGTCGCAGCTGCGCAAGAAGCTCGAGGCCGACCCCGCCCACCCGGTGCACCTTCTCACCGAGCAGGGCATGGGCTACCGCCTGGTGCCGGGCGACTAG
PROTEIN sequence
Length: 226
MKVLVADDDPQLVRALRITLSAHGYEVIAAPDGAAAVTLAAQAHPDIVLLDLGMPRLDGVQVIEALRGWTTAPIIVVSGRTGSADKVEALDAGADDYVTKPFQVDELLARLRALARRRPDAAGEPVVRFADVTIDLAAKSVTRAGARVHLTPTEWRMLEFLARNPDALVTRQTLLKEIWASEQIADTGYLRLYMSQLRKKLEADPAHPVHLLTEQGMGYRLVPGD*