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SCNpilot_cont_1000_p_scaffold_1229_7

Organism: SCNPILOT_CONT_1000_P_Microbacterium_71_138

near complete RP 47 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 10 / 38
Location: 6792..8468

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-70 n=1 Tax=Agromyces italicus RepID=UPI0003B465E2 similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 564.0
  • Bit_score: 262
  • Evalue 7.70e-67
IgA FC receptor {ECO:0000313|EMBL:KJL24378.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 608.0
  • Bit_score: 268
  • Evalue 2.00e-68
hemagglutinin/hemolysin-like protein similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 602.0
  • Bit_score: 255
  • Evalue 2.90e-65

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Taxonomy

Microbacterium foliorum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1677
ATGGTCGACGACGCGCGCCGGAGTGACGCCGCACTGCTCCTGCAGGCGAGGGACGGCGATGCCGCGGCATGGGGGCAGCTCTGGAGCCGCCATCACCCCGCGGCGATCAGCGCCGCGCGAGCGCAGGGCGTGACGGAGGCCGACGCGGAGGATCTCGCGCAGGAAGCATTCGCCCGCGTGCAGGAGGCGGTGCAGCGGGGGAACGGGCCGACCGAGGCATTCCGTCCCTACCTGTTCACGACCGTGCGCCGGCTCGCCTGGCGTCATCTCGAACGAGCCGGCCTCGAGCCCACGAGCGACCCGCGCGGGCTCGACGCCCTTGCCCCGAGCGTCGACTCCCCCGAGGACCAGGCCGTCGCCCTGTCGGATCGCGACGCGATCGTGCGGGCGTTCCGGAGCCTCCCGATCACCTGGCAGGAGGTGCTGTGGCTCACGGCCGTCGAGGGACGCGGGCCGCGCGACGCGGCGCCGCTGCTGGGCCTGCGCCCGACGGCGGTGGCGAATCTGAGTCGTCGCGCCCGTGAGGGTCTGAAGCGAGCGTGGATCACCGAGAACCTGCCGAGCGCGACAGGCCCCGAGTGCACGTGGACGAGGGAGCACCTCGCGGCACGGGTGCGACGGTCGGCCACGACGACGCAGAACGAGCGGATGTCTCGTCACCTCGCCGAGTGCGACGCGTGCCGCGCCCTGGCCGCCGAGGCGAGAGACCTGTCCCGGCATCTCGCACTCGTGCTGCTGCCGATCGTGTTCGGCGCAGGTGCAGCGGCGTTCGCCGCACTCTCGGGAGCTCCGGCGGCCGGTGGCGCCGCGGCCACCGCGTCGAGCGCAGGTGCCACGGCGAGCGGGGTGTCGGCGGGATCCGCGACCATCGCGACCTCGGCGATCGTCGGCGGATCGGTCGCCCTCGTCGGTGCCGTCGCGGCGGCCGCTGTGGCGGCCACGATGTTCGCGACGTCGGTGTCACCGCCTCCCGCTCCGCCCGCCGCCGCAGCCGTGCCGATGACCGACGACGGGCCGTCCGCCTCCCCCTCGATGCCCACCGCCGAGCCCGACCCCACCCCCGCCATACCGTCGCCGAGCCCGGCGGACCGCGGCCAGACCACCCCTTCGCGCGCGGCTGACCCGTCGCCCGAACCGGAGGCGGAGCCCTCGGCGAGCCCGATCCGAGACGCGGGCCCGACACCGATGCCGGCGCAGACGGCGAGCCCGACACCGACGCCGACCCCAACGCCGACGCCGACGCCGACATCGACCCCGACCCCGACCCCAACGCCGACGCCGACGCCGACATCGACCCCGACCGCCACTCCGACCCCGACTCCCACTCCCACTCCCACTCCCACTCCCACTCCCACTCCCACTCCCACGGTGCCGTCAGGAGTCGACGGGTCGACACCGACCGTTCCCGCCACACCGCAGTTCCGCGGCGGGCTGTGGGTCCACGGCGCCACAACCGACAGCCTCTTCTTCGCCGTCGACGTGCCGCCGGGAGCGACGGTGTCGGTCACCGCTCTCGATCGCACCGGCACCGAGGTGTTCCGACTCGGCAGCACGGTCTACGTCTCCGTCGACGGACTCGACCCGATCGCGCTCCGCCTGGCGACCATCACCGTCATCGCGACCGTCGACGGCCGGCTCTCGCGCCCCCTCGTGCTGAACATCGATCAGTTCACGTGA
PROTEIN sequence
Length: 559
MVDDARRSDAALLLQARDGDAAAWGQLWSRHHPAAISAARAQGVTEADAEDLAQEAFARVQEAVQRGNGPTEAFRPYLFTTVRRLAWRHLERAGLEPTSDPRGLDALAPSVDSPEDQAVALSDRDAIVRAFRSLPITWQEVLWLTAVEGRGPRDAAPLLGLRPTAVANLSRRAREGLKRAWITENLPSATGPECTWTREHLAARVRRSATTTQNERMSRHLAECDACRALAAEARDLSRHLALVLLPIVFGAGAAAFAALSGAPAAGGAAATASSAGATASGVSAGSATIATSAIVGGSVALVGAVAAAAVAATMFATSVSPPPAPPAAAAVPMTDDGPSASPSMPTAEPDPTPAIPSPSPADRGQTTPSRAADPSPEPEAEPSASPIRDAGPTPMPAQTASPTPTPTPTPTPTPTSTPTPTPTPTPTPTSTPTATPTPTPTPTPTPTPTPTPTPTVPSGVDGSTPTVPATPQFRGGLWVHGATTDSLFFAVDVPPGATVSVTALDRTGTEVFRLGSTVYVSVDGLDPIALRLATITVIATVDGRLSRPLVLNIDQFT*