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AMDSBA4_6

Alias: AMDSBA4_C5

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA4_6_1
unknown

Not on your lists

comp(1..252)
-----------------
DNA (252bp)
protein (84aa)
1..252 - ( gc_cont=0.500)
AMDSBA4_6_2
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

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624..1556
-----------------
DNA (933bp)
protein (311aa)
hypothetical protein
GCN5-related N-acetyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDY2_9CHLR (db=UNIREF evalue=1.3e-14 bit_score=86.3 identity=35.7 coverage=47.90996784565916)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=162 to=310 evalue=3.0e-26 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=20 to=157 evalue=4.6e-17 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA4_6_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1628..2005)
-----------------
DNA (378bp)
protein (126aa)
hypothetical protein (db=KEGG evalue=2.6e-11 bit_score=73.6 identity=38.3 coverage=84.12698412698413)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVU0_9FIRM (db=UNIREF evalue=3.4e-11 bit_score=73.6 identity=38.3 coverage=84.12698412698413)
seg (db=Seg db_id=seg from=13 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=115)
AMDSBA4_6_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2030..2911)
-----------------
DNA (882bp)
protein (294aa)
1,4-dihydroxy-2-naphthoate prenyltransferase (EC:2.5.1.74)
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=2 Tax=Vibrio furnissii RepID=C9PJW8_VIBFU (db=UNIREF evalue=1.8e-26 bit_score=125.6 identity=31.4 coverage=94.5578231292517)
seg (db=Seg db_id=seg from=93 to=107)
seg (db=Seg db_id=seg from=112 to=128)
AMDSBA4_6_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(2933..4447)
-----------------
DNA (1515bp)
protein (505aa)
O-succinylbenzoate-CoA ligase
O-succinylbenzoate--CoA ligase n=1 Tax=Halobacterium sp. DL1 RepID=G4ID99_9EURY (db=UNIREF evalue=2.7e-51 bit_score=208.8 identity=28.2 coverage=96.43564356435644)
Acetyl-CoA synthetase-like (db=superfamily db_id=SSF56801 from=9 to=498 evalue=1.6e-143)
ATP-DEPENDENT AMP-BINDING ENZYME FAMILY MEMBER (db=HMMPanther db_id=PTHR11968 from=11 to=499 evalue=6.1e-139)
AMDSBA4_6_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4444..5271)
-----------------
DNA (828bp)
protein (276aa)
naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RCB5_9ACTO (db=UNIREF evalue=7.6e-104 bit_score=382.5 identity=67.7 coverage=97.10144927536231)
ENOYL_COA_HYDRATASE (db=PatternScan db_id=PS00166 from=113 to=133 evalue=0.0 interpro_id=IPR018376 interpro_description=Enoyl-CoA hydratase/isomerase, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
AMDSBA4_6_7
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(5277..6128)
-----------------
DNA (852bp)
protein (284aa)
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase n=4 Tax=Staphylococcus lugdunensis RepID=D3QDW5_STALH (db=UNIREF evalue=8.2e-37 bit_score=159.8 identity=35.6 coverage=87.67605633802818)
seg (db=Seg db_id=seg from=179 to=190)
menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclo (db=HMMTigr db_id=TIGR03695 from=26 to=275 evalue=1.4e-90 interpro_id=IPR022485 interpro_description=2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO=Biological Process: menaquinone biosynthetic process (GO:0009234), Molecular Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity (GO:0070205))
AMDSBA4_6_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6115..7881)
-----------------
DNA (1767bp)
protein (589aa)
menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=3 Tax=Haloarcula RepID=MEND_HALMA (db=UNIREF evalue=3.2e-83 bit_score=315.1 identity=36.6 coverage=91.85059422750425)
seg (db=Seg db_id=seg from=73 to=85)
seg (db=Seg db_id=seg from=88 to=99)
AMDSBA4_6_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7830..9263)
-----------------
DNA (1434bp)
protein (478aa)
isochorismate synthase (EC:5.4.4.2)
Isochorismate synthase n=1 Tax=Dickeya dadantii Ech703 RepID=C6CBR4_DICDC (db=UNIREF evalue=1.6e-29 bit_score=136.3 identity=34.2 coverage=57.74058577405857)
isochor_syn: isochorismate synthase (db=HMMTigr db_id=TIGR00543 from=119 to=471 evalue=1.1e-91 interpro_id=IPR004561 interpro_description=Isochorismate synthase GO=Molecular Function: isochorismate synthase activity (GO:0008909), Biological Process: biosynthetic process (GO:0009058))
ADC synthase (db=superfamily db_id=SSF56322 from=45 to=471 evalue=1.4e-86 interpro_id=IPR005801 interpro_description=ADC synthase GO=Biological Process: biosynthetic process (GO:0009058))
AMDSBA4_6_10
unknown

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9729..10199
-----------------
DNA (471bp)
protein (157aa)
9729..10199 + ( gc_cont=0.499)
AMDSBA4_6_11
unknown

Not on your lists

comp(10884..11138)
-----------------
DNA (255bp)
protein (85aa)
10884..11138 - ( gc_cont=0.537)
AMDSBA4_6_12
unknown

Not on your lists

11408..11515
-----------------
DNA (108bp)
protein (36aa)
11408..11515 + ( gc_cont=0.528)
AMDSBA4_6_13
unknown

Not on your lists

11916..12446
-----------------
DNA (531bp)
protein (177aa)
11916..12446 + ( gc_cont=0.563)
AMDSBA4_6_14
unknown

Not on your lists

13046..13165
-----------------
DNA (120bp)
protein (40aa)
13046..13165 + ( gc_cont=0.600)
AMDSBA4_6_15
unknown

Not on your lists

13204..13446
-----------------
DNA (243bp)
protein (81aa)
13204..13446 + ( gc_cont=0.576)
AMDSBA4_6_16
unknown

Not on your lists

14254..14796
-----------------
DNA (543bp)
protein (181aa)
seg (db=Seg db_id=seg from=170 to=180)
ACT-like (db=superfamily db_id=SSF55021 from=1 to=77 evalue=9.2e-09)
AMDSBA4_6_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14741..15772
-----------------
DNA (1032bp)
protein (344aa)
ilvC; ketol-acid reductoisomerase
ilvC; ketol-acid reductoisomerase
Ketol-acid reductoisomerase n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=ILVC_HERA2 (db=UNIREF evalue=1.0e-121 bit_score=442.2 identity=64.9 coverage=96.22093023255815)
AMDSBA4_6_18
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15776..17308
-----------------
DNA (1533bp)
protein (511aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=42 Tax=Listeria RepID=LEU1_LISIN (db=UNIREF evalue=2.1e-107 bit_score=395.2 identity=44.1 coverage=97.26027397260275)
AMDSBA4_6_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17312..18370
-----------------
DNA (1059bp)
protein (353aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=3 Tax=Caulobacter RepID=LEU3_CAUCR (db=UNIREF evalue=9.2e-78 bit_score=296.2 identity=46.7 coverage=97.45042492917847)
seg (db=Seg db_id=seg from=139 to=150)
seg (db=Seg db_id=seg from=245 to=267)
AMDSBA4_6_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18391..20061
-----------------
DNA (1671bp)
protein (557aa)
ilvB; acetolactate synthase large subunit
ilvB; acetolactate synthase large subunit
Acetolactate synthase large subunit n=10 Tax=Bacillus RepID=ILVB_BACSU (db=UNIREF evalue=2.1e-124 bit_score=451.8 identity=41.4 coverage=99.10233393177738)
AMDSBA4_6_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20089..20997
-----------------
DNA (909bp)
protein (303aa)
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched chain amino acid aminotransferase apoenzyme n=1 Tax=Isosphaera pallida ATCC 43644 RepID=E8QZV3_ISOPI (db=UNIREF evalue=1.8e-82 bit_score=311.6 identity=56.9 coverage=92.07920792079209)
AMDSBA4_6_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20994..21833
-----------------
DNA (840bp)
protein (280aa)
prephenate dehydratase (EC:4.2.1.51)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=2 Tax=Sulfobacillus acidophilus RepID=G8TVU8_9FIRM (db=UNIREF evalue=7.8e-80 bit_score=302.8 identity=56.4 coverage=96.42857142857143)
AMDSBA4_6_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22289..23353
-----------------
DNA (1065bp)
protein (355aa)
hydrogenase expression/formation protein HypE
hydrogenase expression/formation protein HypE
AIR synthase related protein domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY39_9EURY (db=UNIREF evalue=4.3e-75 bit_score=287.3 identity=45.6 coverage=97.1830985915493)
seg (db=Seg db_id=seg from=271 to=282)
AMDSBA4_6_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23350..24147
-----------------
DNA (798bp)
protein (266aa)
thiD; phosphomethylpyrimidine kinase
Putative uncharacterized protein (Fragment) n=1 Tax=Melampsora larici-populina 98AG31 RepID=F4RJP5_MELLP (db=UNIREF evalue=9.4e-51 bit_score=206.1 identity=45.7 coverage=95.48872180451127)
seg (db=Seg db_id=seg from=7 to=21)
seg (db=Seg db_id=seg from=246 to=258)
AMDSBA4_6_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24138..24764
-----------------
DNA (627bp)
protein (209aa)
thiamine-phosphate diphosphorylase
Thiamine-phosphate synthase 1 n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SQ46_METLZ (db=UNIREF evalue=9.1e-17 bit_score=92.8 identity=34.2 coverage=73.68421052631578)
thiE: thiamine-phosphate pyrophosphorylase (db=HMMTigr db_id=TIGR00693 from=8 to=198 evalue=7.5e-68 interpro_id=IPR003733 interpro_description=Thiamine monophosphate synthase GO=Molecular Function: thiamine-phosphate diphosphorylase activity (GO:0004789), Biological Process: thiamine biosynthetic process (GO:0009228))
THIAMINE-PHOSPHATE PYROPHOSPHORYLASE (db=HMMPanther db_id=PTHR20857 from=2 to=194 evalue=1.2e-57)
AMDSBA4_6_26
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24767..25411
-----------------
DNA (645bp)
protein (215aa)
TenA family transcriptional regulator (EC:3.5.99.2)
Putative transcriptional activator 2 n=1 Tax=Pyrococcus sp. ST04 RepID=I3RE62_9EURY (db=UNIREF evalue=2.5e-17 bit_score=94.7 identity=28.6 coverage=91.16279069767442)
Heme oxygenase-like (db=superfamily db_id=SSF48613 from=2 to=205 evalue=1.9e-53 interpro_id=IPR016084 interpro_description=Haem oxygenase-like, multi-helical)
no description (db=Gene3D db_id=G3DSA:1.20.910.10 from=3 to=205 evalue=7.9e-51 interpro_id=IPR016084 interpro_description=Haem oxygenase-like, multi-helical)
AMDSBA4_6_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25516..25875
-----------------
DNA (360bp)
protein (120aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSI4_9FIRM (db=UNIREF evalue=1.4e-54 bit_score=217.6 identity=85.7 coverage=98.33333333333333)
METHYLGLYOXAL_SYNTH (db=PatternScan db_id=PS01335 from=54 to=61 evalue=0.0 interpro_id=IPR018148 interpro_description=Methylglyoxal synthase, active site GO=Molecular Function: methylglyoxal synthase activity (GO:0008929), Biological Process: methylglyoxal biosynthetic process (GO:0019242))
MGSA: methylglyoxal synthase (db=HMMTigr db_id=TIGR00160 from=1 to=118 evalue=1.3e-51 interpro_id=IPR004363 interpro_description=Methylglyoxal synthase GO=Molecular Function: methylglyoxal synthase activity (GO:0008929), Biological Process: methylglyoxal biosynthetic process (GO:0019242))
AMDSBA4_6_28
Listeria seeligeri, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26175..27299
-----------------
DNA (1125bp)
protein (375aa)
protein-tyrosine-phosphatase
Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YNH4_NECH7 (db=UNIREF evalue=6.9e-15 bit_score=87.4 identity=27.9 coverage=62.4)
seg (db=Seg db_id=seg from=303 to=314)
TYR_PHOSPHATASE_1 (db=PatternScan db_id=PS00383 from=267 to=277 evalue=0.0 interpro_id=IPR016130 interpro_description=Protein-tyrosine phosphatase, active site GO=Molecular Function: protein tyrosine phosphatase activity (GO:0004725), Biological Process: dephosphorylation (GO:0016311), Molecular Function: phosphatase activity (GO:0016791))
AMDSBA4_6_29
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27415..28302)
-----------------
DNA (888bp)
protein (296aa)
hypothetical protein
seg (db=Seg db_id=seg from=140 to=153)
seg (db=Seg db_id=seg from=58 to=73)
Uncharacterized protein n=1 Tax=Brevibacillus sp. BC25 RepID=J3A918_9BACL
AMDSBA4_6_30
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28447..29070)
-----------------
DNA (624bp)
protein (208aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0MSP2_PHYIT (db=UNIREF evalue=1.0e-15 bit_score=89.4 identity=32.2 coverage=90.38461538461539)
seg (db=Seg db_id=seg from=75 to=86)
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=1 to=128 evalue=8.1e-35 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
Displaying items 1-30 of 89 in total

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