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AMDSBA4_2_29

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(28193..28777)

Top 3 Functional Annotations

Value Algorithm Source
Tetracyclin repressor-like, C-terminal domain (db=superfamily db_id=SSF48498 from=77 to=191 evalue=3.2e-18 interpro_id=IPR011075 interpro_description=Tetracycline transcriptional regulator, TetR-related, C-terminal) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.20e-18
Homeodomain-like (db=superfamily db_id=SSF46689 from=3 to=74 evalue=7.1e-17 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.10e-17
(db=HMMPfam db_id=PF00440 from=10 to=56 evalue=2.4e-16 interpro_id=IPR001647 interpro_description=DNA-binding HTH domain, TetR-type GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.40e-16

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 585
ATGGCACGGGCCAGTAAAAAATCAGAAATTGTTGAGGCAGCAGCGTACTTATTTAGTACCAAAGGGTACCATGCCACGACGGTGCGCGATATTGCGGAACGGGCCGGAATTTTGTCCGGCAGCCTATATGCCCATATAGATAACAAAGAAGCACTATTGCGCGAGATTGTGAAACAAGCGGCAAACCAATTTATGAGTGCAGTGCAGCCCATCGTAGACAGCGATCTGCCGATTACGGTCAAATTTACCGAGGCGGTCCGGGCTCATGTAGGGGTGGTAACCAACAGTCTTGACGGGGCACGGATCTATTTGGATGAAAAGGCAACATTTAGTGATGAGGGACGGCAAGAATTTTTGACCTTAAGACGCGCCTATGAAAATTTATGGACACGTCTCATTGAGCAAGGCATTAAGCAGTCAGTATTTTGGATTGAAGACCCGCATTTAGCGCGTTTGTTGGTATTGTCAGCACTCAACGGGATCCATCGCTGGTATCGTCCTCAAGGCCGTCTTACGCCCGAGGTTATCGCCTCTCGTTATTCATCATGGTTGTTACGGTTGTTGCAACCAGAAATGCCGCGCTAA
PROTEIN sequence
Length: 195
MARASKKSEIVEAAAYLFSTKGYHATTVRDIAERAGILSGSLYAHIDNKEALLREIVKQAANQFMSAVQPIVDSDLPITVKFTEAVRAHVGVVTNSLDGARIYLDEKATFSDEGRQEFLTLRRAYENLWTRLIEQGIKQSVFWIEDPHLARLLVLSALNGIHRWYRPQGRLTPEVIASRYSSWLLRLLQPEMPR*