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AMDSBA4_9_15

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(16554..17147)

Top 3 Functional Annotations

Value Algorithm Source
HTH_TETR_1 (db=PatternScan db_id=PS01081 from=28 to=58 evalue=0.0 interpro_id=IPR023772 interpro_description=DNA-binding HTH domain, TetR-type, conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Homeodomain-like (db=superfamily db_id=SSF46689 from=5 to=78 evalue=1.8e-18 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.80e-18
(db=HMMPfam db_id=PF00440 from=16 to=59 evalue=3.3e-16 interpro_id=IPR001647 interpro_description=DNA-binding HTH domain, TetR-type GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.30e-16

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 594
ATGTCTGCAACGCGTACCAGGCAAAAGAGGGAGACTCACCGCAAAATTTTTGACGCGGCCCTGCACCTGTTCCGTACCCAAGGGGTAGAAGCTACTTCCGTTGATCAAATTGTACAGGCCGCCGGCGTGTCCAAAGGATCGTTCTTTGTACACTTTCCTACGAAGGATGCAATTTTTACTCTGTATGTTGACCACCTTACCGCTGAACTGCTGCCGTCTTTACCGCAGTGGATGCAGCTGGCGCCTCTCAGCGGCTTGCAACAGGCTACGCAGGCATTGACGGAGGCTGTGGAGCAAGACCTGGGTCTTGTGCCGTATATTATTCAAGCCGAGTTACTCGGCCAGCCATGGGACGATGGTCGGCCGACAGCTTTGCAGCAGTTATTTGGACCGTTGGTGGCCGAAGCGCAATCTTCTGGCGATTTAAGGCACGACCTGTCGGTTTCTCAGATCGTTGACCACCTTCTATCGACGTATTTCATTGCTTTGATTTGGGGGTTCCGCCGTGGTCAACGTCTCGGCTCTGCTATTGCTCTACCCATGCGCTTAGCGTTGGATGGGGTCAGGCCTCGCCCTGAGGAGGCGCGATTGTGA
PROTEIN sequence
Length: 198
MSATRTRQKRETHRKIFDAALHLFRTQGVEATSVDQIVQAAGVSKGSFFVHFPTKDAIFTLYVDHLTAELLPSLPQWMQLAPLSGLQQATQALTEAVEQDLGLVPYIIQAELLGQPWDDGRPTALQQLFGPLVAEAQSSGDLRHDLSVSQIVDHLLSTYFIALIWGFRRGQRLGSAIALPMRLALDGVRPRPEEARL*