ggKbase home page

AMDSBA4_9_28

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 32001..33113

Top 3 Functional Annotations

Value Algorithm Source
  • Identity: null
  • Coverage: null
  • Bit_score: null
RuBisCo, C-terminal domain (db=superfamily db_id=SSF51649 from=106 to=362 evalue=2.8e-56 interpro_id=IPR000685 interpro_description=Ribulose bisphosphate carboxylase, large subunit, C-terminal GO=Molecular Function: magnesium ion binding (GO:0000287), Cellular Component: plastid (GO:0009536), Biological Process: carbon fixation (GO:0015977), Molecular Function: ribulose-bisphosphate carboxylase activity (GO:0016984)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.80e-56
no description (db=Gene3D db_id=G3DSA:3.20.20.110 from=105 to=362 evalue=8.8e-50 interpro_id=IPR000685 interpro_description=Ribulose bisphosphate carboxylase, large subunit, C-terminal GO=Molecular Function: magnesium ion binding (GO:0000287), Cellular Component: plastid (GO:0009536), Biological Process: carbon fixation (GO:0015977), Molecular Function: ribulose-bisphosphate carboxylase activity (GO:0016984)) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.80e-50

Lists

This feature is not on any list.

Notes

belongs to YkrW family of RubisCO (from IV) Nicholas Justice (1/17/13)

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1113
ATGAACTCGTCATTCGTTACTGCCACATATCAGGTGCCCTGGTCAGACAATCTTACTGAGCGGGCACAAGCCATAGCCAATGGCCTGGCTATGAGTTCCTCACGTCAAGATGAATTACCACAATGGCTTGGCGAAATAGCCAATATTGACCGCCCGGCGCACGACATCGGCTTATTTAGCATCCGGTACCCGGTACACAACATTAAACCAACTATTGCCTCATTGCTAACAGTGGTTTTTGGCAGTCTTTCTCTTGAAGGACAAATCCGTTTGGTGGGATTGGATATACCTGAAGCATTCCTGCGGCAGTTCCCCGGTCCTAGTCATGGAGTTCCCGGCCTTCGAGCAAAATTCGGAATTCACCATCGCCCATTTGTCATGTCCGTCTTTAAGCGTGAAAATGGTGCAACTCTAGAGGAGTTCACAGACTCATTTCGGCAGCAAATCGATGGGGGCGTGGACTGGGTCAAAGATGATGAAATCTATTTCTTTGACGATCCCGCACCATTGCTCCAGCGAGTCGCTATTGCCAAGAGGCTACTCGCTGATCGGGCCGATCAGACCGGACAACTCGGTTTTTATGCGCCCAATCTTACCGGAACTCCCCGAGAAATTTTGGATACCGCGCATCGGGCCATCGATGCCGGCGCCCAGGCATTTCTCATCACTCCTTTCGTGACTGGGCTCGATATTCTGGTGGAATTGCGACGCGAGCACATAGAGGTGCCTTTCATAGCCCATCCGGCATTTTCGGGAGGGCTGGTGGCACCACACACCTGGGGTGTAGCCTCCGAAATTTTGCTGGGTCTCTTGCCACGCATCGCTGGCGCCGACATTGTCCTGTTTCCGTCGCCTTATGGAAGCGCAGCGATTTCTCGTTCAGAGGCTTTGGCCGTTCATCACCGTTTGTCCGCACCGGGCCAGTTTCCTGAGGTCATTTCTGGACCGTCATCCGGTATCCATCTAGGTTTGGTAGGACAGCTCCTAGAAGATTTTGGCTATGATATTGTGGTCAATGTGGAAAATGCCATCCACGGTCACCCTCATGGCATTACGGCTGGTGCCCGAATGCTAATGGATGCGGTTGTGGACGTTTGCCGCGGCAATGCCTAA
PROTEIN sequence
Length: 371
MNSSFVTATYQVPWSDNLTERAQAIANGLAMSSSRQDELPQWLGEIANIDRPAHDIGLFSIRYPVHNIKPTIASLLTVVFGSLSLEGQIRLVGLDIPEAFLRQFPGPSHGVPGLRAKFGIHHRPFVMSVFKRENGATLEEFTDSFRQQIDGGVDWVKDDEIYFFDDPAPLLQRVAIAKRLLADRADQTGQLGFYAPNLTGTPREILDTAHRAIDAGAQAFLITPFVTGLDILVELRREHIEVPFIAHPAFSGGLVAPHTWGVASEILLGLLPRIAGADIVLFPSPYGSAAISRSEALAVHHRLSAPGQFPEVISGPSSGIHLGLVGQLLEDFGYDIVVNVENAIHGHPHGITAGARMLMDAVVDVCRGNA*