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AMDSBA4_48_3

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 2077..2625

Top 3 Functional Annotations

Value Algorithm Source
CheY-like (db=superfamily db_id=SSF52172 from=15 to=178 evalue=1.9e-18 interpro_id=IPR011006 interpro_description=CheY-like superfamily) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.90e-18
(db=HMMPfam db_id=PF03861 from=126 to=177 evalue=1.4e-13 interpro_id=IPR005561 interpro_description=ANTAR domain GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-13
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=125 to=178 evalue=1.7e-09 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.70e-09

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGAGTTGAGGAAGTCAAGACCAAGCCAGAGAAGTCGGTTAAGGGGATTGCGGTCTTGCTATCCAATGCGACATTAGCGAACCATCTCTCTGATATTTTGGTACGCCTTGAATATCATGTGTGTCGAGGGCCAATCGATCGAGACATTAACCATGTCTATGTGGTTGATACCAAATCCCTACCACGGGTACCGTGGCCGAGCCCGAGGGTGCTCTTTGCGTCTTCATTAAGTCCCGCCATTATCGAACTCTGCGTCCGTATGCAATGTTTAGGCATTATTGTGCCATCACAGGGGGTTTTAGAACTCAAGGCAACCTTTGATATTGCCCTCATGATTGCCAACAACCAGTGTGCTTTAGAAACAGCCAATAGTCGGTTGCTCCGCAAACTTCGAGAACGGAAAACGATTGAAATGGCTAAAGAAATGCTGAAAAAACGCTATTTGATAGACGAGGAGCGCGCCTACCATATGATTCGCCGAGAAGCTATGAACAGTCGGCGCACGCTAGGGGAAGTGGCGGAAGAGTTCTTATTGAAACATGAGTGA
PROTEIN sequence
Length: 183
MRVEEVKTKPEKSVKGIAVLLSNATLANHLSDILVRLEYHVCRGPIDRDINHVYVVDTKSLPRVPWPSPRVLFASSLSPAIIELCVRMQCLGIIVPSQGVLELKATFDIALMIANNQCALETANSRLLRKLRERKTIEMAKEMLKKRYLIDEERAYHMIRREAMNSRRTLGEVAEEFLLKHE*