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AMDSBA4_51_40 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
78.9 227.0 364 1.60e-98 say:TPY_0329
30S ribosomal protein S3 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RS3_GEMAT (db=UNIREF evalue=4.1e-44 bit_score=183.3 identity=61.5 coverage=86.3905325443787) similarity UNIREF
DB: UNIREF
61.5 86.39 183 4.06e-44 say:TPY_0329
RIBOSOMAL_S3 (db=PatternScan db_id=PS00548 from=106 to=140 evalue=0.0 interpro_id=IPR018280 interpro_description=Ribosomal protein S3, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
null null null 0.0 say:TPY_0329
rpsC_bact: ribosomal protein S3 (db=HMMTigr db_id=TIGR01009 from=1 to=154 evalue=7.8e-73 interpro_id=IPR005704 interpro_description=Ribosomal protein S3, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
null null null 7.80e-73 say:TPY_0329
CHLOROPLAST 30S RIBOSOMAL PROTEIN S3 (db=HMMPanther db_id=PTHR11760:SF10 from=32 to=167 evalue=3.9e-69) iprscan interpro
DB: HMMPanther
null null null 3.90e-69 say:TPY_0329
30S/40S RIBOSOMAL PROTEIN S3 (db=HMMPanther db_id=PTHR11760 from=32 to=167 evalue=3.9e-69) iprscan interpro
DB: HMMPanther
null null null 3.90e-69 say:TPY_0329
Ribosomal protein S3 C-terminal domain (db=superfamily db_id=SSF54821 from=50 to=150 evalue=4.0e-40 interpro_id=IPR001351 interpro_description=Ribosomal protein S3, C-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: superfamily
null null null 4.00e-40 say:TPY_0329
no description (db=Gene3D db_id=G3DSA:3.30.1140.32 from=51 to=150 evalue=1.9e-38 interpro_id=IPR001351 interpro_description=Ribosomal protein S3, C-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: Gene3D
null null null 1.90e-38 say:TPY_0329
(db=HMMPfam db_id=PF00189 from=62 to=145 evalue=4.0e-33 interpro_id=IPR001351 interpro_description=Ribosomal protein S3, C-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPfam
null null null 4.00e-33 say:TPY_0329
(db=HMMPfam db_id=PF07650 from=6 to=60 evalue=6.4e-13 interpro_id=IPR004044 interpro_description=K Homology, type 2 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null null null 6.40e-13 say:TPY_0329
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=2 to=59 evalue=2.0e-12 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: superfamily
null null null 2.00e-12 say:TPY_0329
no description (db=HMMSmart db_id=SM00322 from=2 to=68 evalue=2.9e-07 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
null null null 2.90e-07 say:TPY_0329
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=2 to=50 evalue=1.7e-06 interpro_id=IPR015946 interpro_description=K homology domain-like, alpha/beta) iprscan interpro
DB: Gene3D
null null null 1.70e-06 say:TPY_0329
KH_TYPE_2 (db=ProfileScan db_id=PS50823 from=1 to=50 evalue=12.322 interpro_id=IPR004044 interpro_description=K Homology, type 2 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null null null 1.23e+01 say:TPY_0329
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="S UNIPROT
DB: UniProtKB
78.9 227.0 364 8.20e-98 G8TXG3_SULAD
BSCG--ribosomal--protein--S3 similarity BSCG null null null null