Alias: AMDSBA4_C50
| name | lists | location/seqs | functional annotations | notes |
|---|---|---|---|---|
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AMDSBA4_51_1
unknown
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Not on your lists |
2..256
----------------- DNA (255bp) protein (85aa) |
2..256 + ( gc_cont=0.475)
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AMDSBA4_51_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(613..1041)
----------------- DNA (429bp) protein (143aa) |
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXJ6_9FIRM (db=UNIREF evalue=3.6e-41 bit_score=173.3 identity=57.2 coverage=95.8041958041958)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXJ6_SULAD
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AMDSBA4_51_3
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria
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Not on your lists |
1226..2146
----------------- DNA (921bp) protein (307aa) |
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Desulfurococcus mucosus DSM 2162 RepID=E8R9N3_DESM0 (db=UNIREF evalue=6.0e-25 bit_score=120.6 identity=32.2 coverage=84.69055374592834)
seg (db=Seg db_id=seg from=247 to=259)
2-HYDROXYACID DEHYDROGENASE (db=HMMPanther db_id=PTHR10996 from=59 to=301 evalue=4.8e-67)
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AMDSBA4_51_4
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria
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Not on your lists |
comp(2143..2952)
----------------- DNA (810bp) protein (270aa) |
ABC transporter
ABC-type multidrug transport system, permease component n=1 Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F6X7_9THEM (db=UNIREF evalue=1.1e-62 bit_score=245.7 identity=43.8 coverage=98.51851851851852)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=76)
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AMDSBA4_51_5
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria
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Not on your lists |
comp(2999..3817)
----------------- DNA (819bp) protein (273aa) |
ABC transporter
Methionine import ATP-binding protein MetN 1 n=79 Tax=Bacillus RepID=METN1_BACC1 (db=UNIREF evalue=1.8e-25 bit_score=122.1 identity=32.1 coverage=83.15018315018315)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=12 to=254 evalue=1.1e-79)
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF16 from=12 to=254 evalue=1.1e-79)
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AMDSBA4_51_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
4237..5082
----------------- DNA (846bp) protein (282aa) |
type 11 methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=13 to=258 evalue=1.1e-30)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=38 to=207 evalue=1.1e-26)
(db=HMMPfam db_id=PF08241 from=54 to=153 evalue=1.1e-17 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
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AMDSBA4_51_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(5071..5931)
----------------- DNA (861bp) protein (287aa) |
NAD-dependent epimerase/dehydratase
Predicted nucleoside-diphosphate-sugar epimerase n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K1C2_9BACT (db=UNIREF evalue=4.0e-31 bit_score=141.0 identity=35.9 coverage=73.5191637630662)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=213 evalue=7.7e-46)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=3 to=228 evalue=4.8e-35 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
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AMDSBA4_51_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6042..6710)
----------------- DNA (669bp) protein (223aa) |
secretion protein HlyD family protein
rbh
secretion protein HlyD family protein
rbh
seg (db=Seg db_id=seg from=80 to=93)
seg (db=Seg db_id=seg from=6 to=25)
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AMDSBA4_51_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6758..8314)
----------------- DNA (1557bp) protein (519aa) |
EmrB/QacA subfamily drug resistance transporter
rbh
EmrB/QacA subfamily drug resistance transporter
rbh
Efflux protein QacA n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GMK8_STRC2 (db=UNIREF evalue=9.4e-39 bit_score=167.2 identity=25.9 coverage=94.79768786127167)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=316)
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AMDSBA4_51_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8341..8964)
----------------- DNA (624bp) protein (208aa) |
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXJ1_9FIRM (db=UNIREF evalue=3.3e-35 bit_score=154.1 identity=41.3 coverage=98.5576923076923)
seg (db=Seg db_id=seg from=84 to=104)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
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AMDSBA4_51_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8964..9803)
----------------- DNA (840bp) protein (280aa) |
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXJ0_9FIRM (db=UNIREF evalue=6.7e-15 bit_score=87.0 identity=27.8 coverage=68.92857142857143)
seg (db=Seg db_id=seg from=251 to=268)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
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AMDSBA4_51_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(9871..10296)
----------------- DNA (426bp) protein (142aa) |
regulatory protein MarR
HTH_MARR_1 (db=PatternScan db_id=PS01117 from=62 to=96 evalue=0.0 interpro_id=IPR023187 interpro_description=Transcriptional regulator MarR-type, conserved site)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=5 to=136 evalue=1.3e-29)
no description (db=HMMSmart db_id=SM00347 from=23 to=123 evalue=1.5e-23 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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AMDSBA4_51_13
unknown
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Not on your lists |
10639..11022
----------------- DNA (384bp) protein (128aa) |
(db=HMMPfam db_id=PF01471 from=53 to=89 evalue=5.3e-07 interpro_id=IPR002477 interpro_description=Peptidoglycan binding-like GO=Biological Process: metabolic process (GO:0008152))
PGBD-like (db=superfamily db_id=SSF47090 from=12 to=89 evalue=2.9e-06 interpro_id=IPR002477 interpro_description=Peptidoglycan binding-like GO=Biological Process: metabolic process (GO:0008152))
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AMDSBA4_51_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(11033..11944)
----------------- DNA (912bp) protein (304aa) |
L-proline dehydrogenase (EC:1.5.99.8)
L-proline dehydrogenase (EC:1.5.99.8)
L-proline dehydrogenase n=2 Tax=Sulfobacillus acidophilus RepID=G8TXI8_9FIRM (db=UNIREF evalue=1.2e-115 bit_score=421.8 identity=68.3 coverage=99.3421052631579)
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AMDSBA4_51_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(11949..12716)
----------------- DNA (768bp) protein (256aa) |
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Pelobacter propionicus DSM 2379 RepID=TRUA_PELPD (db=UNIREF evalue=1.6e-23 bit_score=115.5 identity=33.5 coverage=92.96875)
seg (db=Seg db_id=seg from=34 to=50)
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=1 to=250 evalue=1.9e-54 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
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AMDSBA4_51_16
unknown
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Not on your lists |
comp(12698..13399)
----------------- DNA (702bp) protein (234aa) |
seg (db=Seg db_id=seg from=127 to=145)
seg (db=Seg db_id=seg from=54 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=145)
transmembrane_regions (db=TMHMM db_id=tmhmm from=91 to=113)
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AMDSBA4_51_17
MPF_Thermotogae_50_1627, Thermotogales, Thermotogae, Thermotogae, Bacteria
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Not on your lists |
comp(13363..14127)
----------------- DNA (765bp) protein (255aa) |
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=5 to=172 evalue=7.2e-24)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=192 evalue=1.3e-28)
COBALT ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF22 from=5 to=172 evalue=7.2e-24)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=3 to=192 evalue=1.6e-23)
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AMDSBA4_51_18
Geobacillus sp. JF8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(14103..14819)
----------------- DNA (717bp) protein (239aa) |
cobalt ABC transporter ATP-binding protein
Sulfate-transporting ATPase n=5 Tax=Enterobacteriaceae RepID=G7LV70_9ENTR (db=UNIREF evalue=2.8e-14 bit_score=84.7 identity=30.0 coverage=89.1213389121339)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=201 evalue=6.9e-42)
COBALT ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF22 from=2 to=201 evalue=6.9e-42)
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AMDSBA4_51_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(14874..15218)
----------------- DNA (345bp) protein (115aa) |
BSCG--ribosomal--protein--L17
50S ribosomal protein L17P
50S ribosomal protein L17 n=2 Tax=Sulfobacillus acidophilus RepID=G8TXI6_9FIRM (db=UNIREF evalue=1.6e-47 bit_score=194.1 identity=85.1 coverage=98.26086956521739)
RIBOSOMAL PROTEIN L17 (db=HMMPanther db_id=PTHR14413 from=4 to=114 evalue=1.6e-53 interpro_id=IPR000456 interpro_description=Ribosomal protein L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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AMDSBA4_51_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(15265..16212)
----------------- DNA (948bp) protein (316aa) |
rpoA; DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=RPOA_ALKMQ (db=UNIREF evalue=9.0e-109 bit_score=399.1 identity=62.5 coverage=99.36708860759494)
seg (db=Seg db_id=seg from=109 to=122)
seg (db=Seg db_id=seg from=291 to=308)
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AMDSBA4_51_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(16268..16891)
----------------- DNA (624bp) protein (208aa) |
BSCG--ribosomal--protein--S4
30S ribosomal protein S4
30S ribosomal protein S4
30S ribosomal protein S4 A n=1 Tax=Symbiobacterium thermophilum IAM 14863 RepID=RS4A_SYMTH (db=UNIREF evalue=5.9e-85 bit_score=319.3 identity=71.5 coverage=99.03846153846155)
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AMDSBA4_51_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(16917..17309)
----------------- DNA (393bp) protein (131aa) |
BSCG--ribosomal--protein--S11
30S ribosomal protein S11
30S ribosomal protein S11 n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=RS11_KORVE (db=UNIREF evalue=6.7e-42 bit_score=175.6 identity=64.2 coverage=93.12977099236642)
seg (db=Seg db_id=seg from=4 to=19)
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AMDSBA4_51_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(17335..17706)
----------------- DNA (372bp) protein (124aa) |
BSCG--ribosomal--protein--S13
30S ribosomal protein S13
30S ribosomal protein S13, chloroplastic n=1 Tax=Cyanidioschyzon merolae RepID=RR13_CYAME (db=UNIREF evalue=1.3e-31 bit_score=141.4 identity=52.9 coverage=95.16129032258065)
seg (db=Seg db_id=seg from=50 to=60)
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AMDSBA4_51_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(18161..18916)
----------------- DNA (756bp) protein (252aa) |
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase 1 n=46 Tax=Mycobacterium tuberculosis complex RepID=AMPM1_MYCTU (db=UNIREF evalue=2.2e-57 bit_score=228.0 identity=48.0 coverage=97.61904761904762)
seg (db=Seg db_id=seg from=42 to=54)
PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) (db=HMMPanther db_id=PTHR10804 from=54 to=250 evalue=1.4e-84)
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AMDSBA4_51_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(18909..19571)
----------------- DNA (663bp) protein (221aa) |
adk; adenylate kinase
Adenylate kinase n=1 Tax=Mycoplasma pulmonis UAB CTIP RepID=KAD_MYCPU (db=UNIREF evalue=1.1e-31 bit_score=142.5 identity=32.7 coverage=94.57013574660633)
seg (db=Seg db_id=seg from=117 to=131)
ADENYLATE_KINASE (db=PatternScan db_id=PS00113 from=83 to=94 evalue=0.0 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase-containing compound metabolic process (GO:0006139), Molecular Function: nucleobase-containing compound kinase activity (GO:0019205))
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AMDSBA4_51_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(19568..20848)
----------------- DNA (1281bp) protein (427aa) |
BSCG--Preprotein--translocase--subunit--SecY
preprotein translocase subunit SecY
preprotein translocase subunit SecY
Protein translocase subunit SecY n=2 Tax=Sulfobacillus acidophilus RepID=G8TXH7_9FIRM (db=UNIREF evalue=3.8e-195 bit_score=686.4 identity=79.6 coverage=98.12646370023418)
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AMDSBA4_51_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20865..21302)
----------------- DNA (438bp) protein (146aa) |
BSCG--ribosomal--protein--L15
50S ribosomal protein L15
50S ribosomal protein L15 n=12 Tax=Microcystis RepID=RL15_MICAN (db=UNIREF evalue=2.0e-26 bit_score=124.4 identity=47.7 coverage=98.63013698630137)
seg (db=Seg db_id=seg from=11 to=34)
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AMDSBA4_51_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(21299..21499)
----------------- DNA (201bp) protein (67aa) |
BSCG--ribosomal--protein--L30
Ribosomal protein L30p (db=HMMPIR db_id=PIRSF002211 from=1 to=60 evalue=8.1e-32 interpro_id=IPR005996 interpro_description=Ribosomal protein L30, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
rpmD_bact: ribosomal protein L30 (db=HMMTigr db_id=TIGR01308 from=4 to=58 evalue=2.5e-29 interpro_id=IPR005996 interpro_description=Ribosomal protein L30, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
Ribosomal protein L30p/L7e (db=superfamily db_id=SSF55129 from=1 to=60 evalue=8.7e-20 interpro_id=IPR016082 interpro_description=Ribosomal protein L30, ferredoxin-like fold domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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AMDSBA4_51_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(21492..22022)
----------------- DNA (531bp) protein (177aa) |
BSCG--ribosomal--protein--S5
30S ribosomal protein S5
30S ribosomal protein S5 n=5 Tax=Arthrobacter RepID=RS5_ARTS2 (db=UNIREF evalue=4.2e-47 bit_score=193.4 identity=57.2 coverage=93.78531073446328)
RIBOSOMAL_S5 (db=PatternScan db_id=PS00585 from=33 to=65 evalue=0.0 interpro_id=IPR018192 interpro_description=Ribosomal protein S5, N-terminal, conserved site)
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AMDSBA4_51_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(22039..22404)
----------------- DNA (366bp) protein (122aa) |
BSCG--ribosomal--protein--L18
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RL18_CARHZ (db=UNIREF evalue=3.5e-37 bit_score=159.8 identity=66.1 coverage=98.36065573770492)
L18_bact: ribosomal protein L18 (db=HMMTigr db_id=TIGR00060 from=7 to=121 evalue=8.9e-54 interpro_id=IPR004389 interpro_description=Ribosomal protein L18, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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