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AMDSBA4_52_3

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(898..1566)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-30 subunit SigH similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 217.0
  • Bit_score: 383
  • Evalue 4.40e-104
RNA polymerase sigma-H factor n=29 Tax=Bacillus RepID=RPSH_BACLI (db=UNIREF evalue=1.6e-80 bit_score=304.7 identity=75.2 coverage=90.13452914798206) similarity UNIREF
DB: UNIREF
  • Identity: 75.2
  • Coverage: 90.13
  • Bit_score: 304
  • Evalue 1.60e-80
rbh UNIREF
DB: UNIREF
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • rbh

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 669
GTGAATATTGGCCCCTCTTGTGAGGTAATCCGCAATTACGATGAAATGGCGGACGAGGACATCGTTTCCGATGCCCGCGAAGGACAAAATGAGGCGTTGGAATTTTTGATCCATAAATATCGGAACTTCGTTCGGGCAAAAGCTCGCTCCTATTTCTTGATTGGAGCAGACCGGGAAGACATCGTGCAAGAGGGCATGATCGGACTATATAAAGCGATTCGGGATTTTCGCAGTGATAAACTGGCTTCGTTTCGTGCCTTTGCTGAACTTTGCATTACACGGCAAATTATTACCGCAATTAAGACGGCGACCAGGCAAAAACACATTCCGTTGAACTCTTACATTTCTTTGAACAAGCCAATTTACGAAGAGGATTCCGATCGCACGTTGATGGATGTGATCTCCACCGTAAGAGTTTCCGACCCCGAGGAAATGATCATTAATCGGGAAGAATTTGGGGATATTGAAGAAAAGATGGGGGAAATTTTAAGCGACCTTGAGTGGAAAGTGCTTATGGCTTACCTCGACGGACGTTCCTACCAAGAAATAGCCATCGATTTGCGTCGGCACGTCAAATCGATCGACAATGCGCTGCAACGTGTAAAACGCAAACTTGAACGCTATTTGGATGGACGGGTGATGGTGGCCATGCCACCGGGAACCGATTGA
PROTEIN sequence
Length: 223
VNIGPSCEVIRNYDEMADEDIVSDAREGQNEALEFLIHKYRNFVRAKARSYFLIGADREDIVQEGMIGLYKAIRDFRSDKLASFRAFAELCITRQIITAIKTATRQKHIPLNSYISLNKPIYEEDSDRTLMDVISTVRVSDPEEMIINREEFGDIEEKMGEILSDLEWKVLMAYLDGRSYQEIAIDLRRHVKSIDNALQRVKRKLERYLDGRVMVAMPPGTD*