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AMDSBA4_87_12 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase, beta' subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] (db=KEGG evalue=2.0e-255 bit_score=887.5 identity=53.9 coverage=82.24852071005917) similarity KEGG
DB: KEGG 		53.9 82.25 887 2.00e-255
DNA-directed RNA polymerase subunit beta' C-terminal section n=1 Tax=Chlamydomonas reinhardtii RepID=RPC2B_CHLRE (db=UNIREF evalue=3.2e-83 bit_score=315.8 identity=54.4 coverage=29.289940828402365) similarity UNIREF
DB: UNIREF 		54.4 29.29 315 3.20e-83
seg (db=Seg db_id=seg from=880 to=891) iprscan interpro
DB: Seg 		null null null null
seg (db=Seg db_id=seg from=115 to=128) iprscan interpro
DB: Seg 		null null null null
coiled-coil (db=Coil db_id=coil from=484 to=505 evalue=NA) iprscan interpro
DB: Coil 		null null null null
rbh rbh UNIREF
DB: UNIREF 		null null null null
rbh rbh KEGG
DB: KEGG 		null null null null
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=4 to=1001 evalue=0.0) iprscan interpro
DB: HMMPanther 		null null null 0.0
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=1 to=991 evalue=0.0) iprscan interpro
DB: superfamily 		null null null 0.0
rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=1 to=993 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		null null null 0.0
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=4 to=1001 evalue=0.0) iprscan interpro
DB: HMMPanther 		null null null 0.0
no description (db=HMMSmart db_id=SM00663 from=80 to=359 evalue=9.0e-185 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMSmart 		null null null 9.00e-185
(db=HMMPfam db_id=PF04998 from=581 to=946 evalue=1.3e-74 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 1.30e-74
no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=10 to=190 evalue=3.5e-64) iprscan interpro
DB: Gene3D 		null null null 3.50e-64
(db=HMMPfam db_id=PF04997 from=20 to=187 evalue=9.7e-58 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 9.70e-58
(db=HMMPfam db_id=PF00623 from=189 to=330 evalue=2.6e-51 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 2.60e-51
no description (db=Gene3D db_id=G3DSA:2.40.40.30 from=191 to=333 evalue=4.7e-32) iprscan interpro
DB: Gene3D 		null null null 4.70e-32
(db=HMMPfam db_id=PF04983 from=334 to=474 evalue=2.0e-20 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 2.00e-20
(db=HMMPfam db_id=PF05000 from=503 to=570 evalue=5.7e-16 interpro_id=IPR007083 interpro_description=RNA polymerase Rpb1, domain 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 5.70e-16