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SCNpilot_expt_500_bf_scaffold_812_17

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(12099..12560)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 142.0
  • Bit_score: 292
  • Evalue 4.60e-76
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 142.0
  • Bit_score: 280
  • Evalue 3.10e-73
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH95_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 142.0
  • Bit_score: 292
  • Evalue 3.20e-76

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
GTGCCGCTTTCACCGAAGGTGAACGAAGACATCATGTTGCTGCACATCATCGCGCGGGGCCGGATCGGGCGCGGGCCCGAGGCCGAACTGGTCGAGCGTTATATGAAGCGCGTGACCTGGGCGCAGAAGATTTCGGAACTTCCCGACACCGGCGGCCGCGTGCCCGCCGCACCTGTCGGCAGTCGTACCGTGCTGCTCGACGAAGGCGGCGAACAGATGTCGTCGCTCGAATTCGCCAAACTGCTGGAAAAATGGCGCGACGGCGGCGTGCGCGAGGCGCGATTCTGCCTTGGCGCTGCCGACGGCTTCACCCCTGACGAGCGCGAGGGGGCCGACAAGGTTATCGCCTTCGGCCGCGCAACCTGGCCGCATCTGATGGCACGTGCGATGCTCGCCGAACAATTATGGCGCGCCACCAGCATCGTCGCGGGCCACCCCTATCACCGCGAGGGCCGCCAGTGA
PROTEIN sequence
Length: 154
VPLSPKVNEDIMLLHIIARGRIGRGPEAELVERYMKRVTWAQKISELPDTGGRVPAAPVGSRTVLLDEGGEQMSSLEFAKLLEKWRDGGVREARFCLGAADGFTPDEREGADKVIAFGRATWPHLMARAMLAEQLWRATSIVAGHPYHREGRQ*